RNA–Protein interactions for RNA: ENST00000472223.5

CCM2-205, Transcript of CCM2 scaffold protein, humanhuman

TSL 3

Gene CCM2, Length 981 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-205ENST00000472223 PITPNAQ00169 270 aa14□□□□□ -0.17
CCM2-205ENST00000472223 AESQ08117 197 aa14□□□□□ -0.17
CCM2-205ENST00000472223 CDNFQ49AH0 187 aa14□□□□□ -0.17
CCM2-205ENST00000472223 SLC35E4Q6ICL7 350 aa14□□□□□ -0.17
CCM2-205ENST00000472223 DUX4L9Q6RFH8 374 aaPredicted RBP14□□□□□ -0.17
CCM2-205ENST00000472223 BAIAP2L2Q6UXY1 529 aa14□□□□□ -0.17
CCM2-205ENST00000472223 ZNF841Q6ZN19 808 aa14□□□□□ -0.17
CCM2-205ENST00000472223 BTN2A1Q7KYR7 527 aa14□□□□□ -0.17
CCM2-205ENST00000472223 ZNF565Q8N9K5 539 aa14□□□□□ -0.17
CCM2-205ENST00000472223 PECRQ9BY49 303 aa14□□□□□ -0.17
CCM2-205ENST00000472223 SHARPINQ9H0F6 387 aa14□□□□□ -0.17
CCM2-205ENST00000472223 DUX4Q9UBX2 424 aa14□□□□□ -0.17
CCM2-205ENST00000472223 MRPS7Q9Y2R9 242 aaKnown RBP14□□□□□ -0.17
CCM2-205ENST00000472223 MEIKINA0A087WXM9 373 aa13.99□□□□□ -0.17
CCM2-205ENST00000472223 SMAD7O15105 426 aaKnown RBP13.99□□□□□ -0.17
CCM2-205ENST00000472223 LIPFP07098 398 aa13.99□□□□□ -0.17
CCM2-205ENST00000472223 SELLP14151 372 aa13.99□□□□□ -0.17
CCM2-205ENST00000472223 GNB3P16520 340 aa13.99□□□□□ -0.17
CCM2-205ENST00000472223 GNG2P59768 71 aa13.99□□□□□ -0.17
CCM2-205ENST00000472223 LCN2P80188 198 aa13.99□□□□□ -0.17
CCM2-205ENST00000472223 MEF2CQ06413 473 aaPredicted RBP13.99□□□□□ -0.17
CCM2-205ENST00000472223 MOGAT2Q3SYC2 334 aa13.99□□□□□ -0.17
CCM2-205ENST00000472223 SIGIRRQ6IA17 410 aa13.99□□□□□ -0.17
CCM2-205ENST00000472223 BTNL3Q6UXE8 466 aa13.99□□□□□ -0.17
CCM2-205ENST00000472223 TRAPPC6BQ86SZ2 158 aa13.99□□□□□ -0.17
CCM2-205ENST00000472223 LINC01356Q8N9X3 169 aa13.99□□□□□ -0.17
CCM2-205ENST00000472223 CMSS1Q9BQ75 279 aaKnown RBP13.99□□□□□ -0.17
CCM2-205ENST00000472223 PTTG2Q9NZH5 202 aa13.99□□□□□ -0.17
CCM2-205ENST00000472223 OR6C3Q9NZP0 311 aa13.99□□□□□ -0.17
CCM2-205ENST00000472223 TRAPPC2LQ9UL33 140 aa13.99□□□□□ -0.17
CCM2-205ENST00000472223 MAP1AP78559 2803 aaPredicted RBP13.99□□□□□ -0.17
CCM2-205ENST00000472223 TRGV10A0A0A0MS01 117 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 hCG_1809904A0A1W2PP81 198 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 A0A1W2PPE2 198 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 A0A1W2PR64 198 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 A0A1W2PRV1 198 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 A8MXK9 166 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 ENSAO43768 121 aaKnown RBP13.98□□□□□ -0.17
CCM2-205ENST00000472223 TPPPO94811 219 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 P2RX3P56373 397 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 TMEM50BP56557 158 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 SEC61A1P61619 476 aaKnown RBP13.98□□□□□ -0.17
CCM2-205ENST00000472223 PNLIPRP3Q17RR3 467 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 SPANXN2Q5MJ10 180 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 CYB5R2Q6BCY4 276 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 LAX1Q8IWV1 398 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 FAM185AQ8N0U4 392 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 OR4M1Q8NGD0 313 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 SULT4A1Q9BR01 284 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 DCTN5Q9BTE1 182 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 ZMAT3Q9HA38 289 aaKnown RBP13.98□□□□□ -0.17
CCM2-205ENST00000472223 LPAR2Q9HBW0 351 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 RAB9BQ9NP90 201 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 KCNIP1Q9NZI2 227 aa13.98□□□□□ -0.17
CCM2-205ENST00000472223 TRAV20A0A0B4J274 112 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 PPIAL4CA0A0B4J2A2 164 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 FABP12A6NFH5 140 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 MSMBP08118 114 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 PPIAL4GP0DN37 164 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 IL2RGP31785 369 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 TAS2R20P59543 309 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 TMEM249Q2WGJ8 235 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 PLAC9Q5JTB6 97 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 HACD4Q5VWC8 232 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 CNIH2Q6PI25 160 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 TRAT1Q6PIZ9 186 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 GLCCI1Q86VQ1 547 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 MAPK1IP1LQ8NDC0 245 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 SETD6Q8TBK2 473 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 DMRTB1Q96MA1 342 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 NCOR1P1Q9H4R4 102 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 C12orf4Q9NQ89 552 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.97□□□□□ -0.171e-6■■■■□ 24.6
CCM2-205ENST00000472223 ZNF581Q9P0T4 197 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 AK3Q9UIJ7 227 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 MGAT4AQ9UM21 535 aa13.97□□□□□ -0.17
CCM2-205ENST00000472223 ODAMA1E959 279 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 POM121CA8CG34 1229 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 FOXI3A8MTJ6 420 aaPredicted RBP13.96□□□□□ -0.17
CCM2-205ENST00000472223 FAM157AC9JC47 383 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 MFNGO00587 321 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 GZMHP20718 246 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 GATA3P23771 443 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 TNFSF8P32971 234 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 PRSS3P35030 304 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 GLIPR1P48060 266 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 PAX5Q02548 391 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 IL18Q14116 193 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 ZNF260Q3ZCT1 412 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 C6orf183Q5T699 404 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 RSBN1Q5VWQ0 802 aaPredicted RBP13.96□□□□□ -0.17
CCM2-205ENST00000472223 SPNS3Q6ZMD2 512 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 ZNF497Q6ZNH5 498 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 IZUMO1Q8IYV9 350 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 DTX3Q8N9I9 347 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 WDFY2Q96P53 400 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 MIXL1Q9H2W2 232 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 GAL3ST2Q9H3Q3 398 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 KIF25Q9UIL4 384 aa13.96□□□□□ -0.17
CCM2-205ENST00000472223 RPUSD1Q9UJJ7 312 aaKnown RBP13.96□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms