RNA–Protein interactions for RNA: ENST00000472155.5

UBXN11-213, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best)

Gene UBXN11, Length 2,646 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-213ENST00000472155 TFAP2EQ6VUC0 442 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 P4HA3Q7Z4N8 544 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 MKXQ8IYA7 352 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 FAM71E2Q8N5Q1 922 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 TMEM178AQ8NBL3 297 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 HIST1H2AAQ96QV6 131 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 KCNIP3Q9Y2W7 256 aa12.81□□□□□ -0.36
UBXN11-213ENST00000472155 KALRNO60229 2985 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 ANKRD30BLA7E2S9 258 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 HSD17B6O14756 317 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 GALR2O43603 387 aaPredicted RBP12.8□□□□□ -0.36
UBXN11-213ENST00000472155 F12P00748 615 aaPredicted RBP12.8□□□□□ -0.36
UBXN11-213ENST00000472155 IFNA21P01568 189 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 TFF1P04155 84 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 GLP1RP43220 463 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 DEFA5Q01523 94 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 FOXF2Q12947 444 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 GAPTQ8N292 157 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 CNEP1R1Q8N9A8 125 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 WFDC1Q9HC57 220 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 CCL28Q9NRJ3 127 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 TMEM100Q9NV29 134 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 FAM86C1Q9NVL1 165 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 FAM96BQ9Y3D0 163 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 RFNGQ9Y644 331 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 HEATR1Q9H583 2144 aaKnown RBP12.8□□□□□ -0.36
UBXN11-213ENST00000472155 ZNF705EA8MWA4 302 aaPredicted RBP12.8□□□□□ -0.36
UBXN11-213ENST00000472155 ABCD4O14678 606 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 LPAR6P43657 344 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 STK11Q15831 433 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 TMEM268Q5VZI3 342 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 TBC1D26Q86UD7 250 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 MRPL30Q8TCC3 161 aaKnown RBP12.8□□□□□ -0.36
UBXN11-213ENST00000472155 HRH4Q9H3N8 390 aa12.8□□□□□ -0.36
UBXN11-213ENST00000472155 MED19A0JLT2 244 aaPredicted RBP12.79□□□□□ -0.36
UBXN11-213ENST00000472155 NKX2-6A6NCS4 301 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 MPPED1O15442 326 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 M6PRP20645 277 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 KCNJ3P48549 501 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 MARC2Q969Z3 335 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 OR51I2Q9H344 312 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 TAF9BQ9HBM6 251 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 PCDHB16Q9NRJ7 776 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 CLCF1Q9UBD9 225 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 FZR1Q9UM11 496 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 MEMO1Q9Y316 297 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 C3orf85A0A1B0GTC6 90 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 SMPD2O60906 423 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 MPV17P39210 176 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 CEBPDP49716 269 aaPredicted RBP12.79□□□□□ -0.36
UBXN11-213ENST00000472155 NAAAQ02083 359 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 PRR18Q8N4B5 295 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 C9orf106Q8NAJ2 232 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 LRRC46Q96FV0 321 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 DNAJB11Q9UBS4 358 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 CEP295Q9C0D2 2601 aa12.79□□□□□ -0.36
UBXN11-213ENST00000472155 FAM74A7A6NL05 159 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 H7C1Q1 480 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 CDK2AP1O14519 115 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 AGPAT2O15120 278 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 GNG3P63215 75 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 NHLH2Q02577 135 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 DEFB109BQ30KR1 87 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 FAM74A3Q4VXF1 159 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 FAM53AQ6NSI3 398 aaPredicted RBP12.78□□□□□ -0.36
UBXN11-213ENST00000472155 PCSK4Q6UW60 755 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 CXorf67Q86X51 503 aaPredicted RBP12.78□□□□□ -0.36
UBXN11-213ENST00000472155 FAM58AQ8N1B3 248 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 DLL3Q9NYJ7 618 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 PTPRBP23467 1997 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 SIRPB1O00241 398 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 GPR31O00270 319 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 PET100P0DJ07 73 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 SAXO1Q8IYX7 474 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 LILRB1Q8NHL6 650 aaPredicted RBP12.78□□□□□ -0.36
UBXN11-213ENST00000472155 SLC25A40Q8TBP6 338 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 RNF141Q8WVD5 230 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 GMPPAQ96IJ6 420 aaPredicted RBP12.78□□□□□ -0.36
UBXN11-213ENST00000472155 DNTTIP1Q9H147 329 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 OR1A1Q9P1Q5 309 aa12.78□□□□□ -0.36
UBXN11-213ENST00000472155 MEX3AA1L020 520 aaKnown RBP12.77□□□□□ -0.36
UBXN11-213ENST00000472155 CDIPTO14735 213 aa12.77□□□□□ -0.36
UBXN11-213ENST00000472155 ZNF44P15621 663 aa12.77□□□□□ -0.36
UBXN11-213ENST00000472155 UCP3P55916 312 aa12.77□□□□□ -0.36
UBXN11-213ENST00000472155 PPP1CBP62140 327 aa12.77□□□□□ -0.36
UBXN11-213ENST00000472155 GUCA2BQ16661 112 aa12.77□□□□□ -0.36
UBXN11-213ENST00000472155 IZUMO4Q1ZYL8 232 aa12.77□□□□□ -0.36
UBXN11-213ENST00000472155 IQCF2Q8IXL9 164 aa12.77□□□□□ -0.36
UBXN11-213ENST00000472155 DMBX1Q8NFW5 382 aa12.77□□□□□ -0.36
UBXN11-213ENST00000472155 PLPPR1Q8TBJ4 325 aa12.77□□□□□ -0.36
UBXN11-213ENST00000472155 IL1F10Q8WWZ1 152 aa12.77□□□□□ -0.36
UBXN11-213ENST00000472155 KIRREL1Q96J84 757 aa12.77□□□□□ -0.36
UBXN11-213ENST00000472155 MAGT1Q9H0U3 335 aa12.77□□□□□ -0.36
UBXN11-213ENST00000472155 FBXW12Q6X9E4 464 aa12.77□□□□□ -0.37
UBXN11-213ENST00000472155 DPPA2Q7Z7J5 298 aa12.77□□□□□ -0.37
UBXN11-213ENST00000472155 SCCPDHQ8NBX0 429 aa12.77□□□□□ -0.37
UBXN11-213ENST00000472155 SUCNR1Q9BXA5 334 aa12.77□□□□□ -0.37
UBXN11-213ENST00000472155 LPAR3Q9UBY5 353 aa12.77□□□□□ -0.37
UBXN11-213ENST00000472155 RELNP78509 3460 aa12.77□□□□□ -0.37
UBXN11-213ENST00000472155 FAM90A10PA6NDY2 464 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 51.8 ms