RNA–Protein interactions for RNA: ENST00000471567.1

SDC3-203, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 589 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-203ENST00000471567 CRTAPO75718 401 aaPredicted RBP12.5□□□□□ -0.41
SDC3-203ENST00000471567 FGF9P31371 208 aaPredicted RBP12.5□□□□□ -0.41
SDC3-203ENST00000471567 GLIPR1P48060 266 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 ATXN7L3Q14CW9 347 aaPredicted RBP12.5□□□□□ -0.41
SDC3-203ENST00000471567 TAF9Q16594 264 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 DEFB112Q30KQ8 113 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 HCP5Q6MZN7 132 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 PDZD9Q8IXQ8 264 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 SUMF2Q8NBJ7 301 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 TMEM104Q8NE00 496 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 TSPAN14Q8NG11 270 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 KCNG3Q8TAE7 436 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 GFI1Q99684 422 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 DPCDQ9BVM2 203 aaPredicted RBP12.5□□□□□ -0.41
SDC3-203ENST00000471567 BANF2Q9H503 90 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 ZNF696Q9H7X3 374 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 OR6C3Q9NZP0 311 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 STUB1Q9UNE7 303 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 AK6Q9Y3D8 172 aaKnown RBP12.5□□□□□ -0.41
SDC3-203ENST00000471567 SOX21Q9Y651 276 aaPredicted RBP12.5□□□□□ -0.41
SDC3-203ENST00000471567 V9GY05 133 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 DSCAML1Q8TD84 2053 aa12.5□□□□□ -0.41
SDC3-203ENST00000471567 TRIM77I1YAP6 450 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 HSPB6O14558 160 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 NPFFO15130 113 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 BPNT1O95861 308 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 GLAP06280 429 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 IGHV1-8P0DP01 117 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 VSIG8P0DPA2 414 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 MYL9P24844 172 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 DLX1P56177 255 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 KLRD1Q13241 179 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 NEDD8Q15843 81 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 MIDNQ504T8 468 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 ATAD3CQ5T2N8 411 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 RSBN1Q5VWQ0 802 aaPredicted RBP12.49□□□□□ -0.41
SDC3-203ENST00000471567 TRAPPC6BQ86SZ2 158 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 PIP4P2Q8N4L2 257 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 ZDHHC22Q8N966 263 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 ZDHHC16Q969W1 377 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 SLC25A28Q96A46 364 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 Q96M66 194 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 SELENOIQ9C0D9 397 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 GAL3ST2Q9H3Q3 398 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 ZMAT3Q9HA38 289 aaKnown RBP12.49□□□□□ -0.41
SDC3-203ENST00000471567 PLGRKTQ9HBL7 147 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 VCX3AQ9NNX9 186 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 RCC2Q9P258 522 aaKnown RBP12.49□□□□□ -0.41
SDC3-203ENST00000471567 SSR3Q9UNL2 185 aa12.49□□□□□ -0.41
SDC3-203ENST00000471567 CLDN34H7C241 214 aa12.48□□□□□ -0.41
SDC3-203ENST00000471567 PRB3Q04118 309 aaPredicted RBP12.48□□□□□ -0.41
SDC3-203ENST00000471567 BAMBIQ13145 260 aa12.48□□□□□ -0.41
SDC3-203ENST00000471567 RBM39Q14498 530 aaKnown RBP12.48□□□□□ -0.41
SDC3-203ENST00000471567 RAB11BQ15907 218 aa12.48□□□□□ -0.41
SDC3-203ENST00000471567 C22orf42Q6IC83 251 aa12.48□□□□□ -0.41
SDC3-203ENST00000471567 SLC35E4Q6ICL7 350 aa12.48□□□□□ -0.41
SDC3-203ENST00000471567 Q6YL49 198 aa12.48□□□□□ -0.41
SDC3-203ENST00000471567 ZNF565Q8N9K5 539 aa12.48□□□□□ -0.41
SDC3-203ENST00000471567 OR13D1Q8NGV5 346 aa12.48□□□□□ -0.41
SDC3-203ENST00000471567 PLPPR1Q8TBJ4 325 aa12.48□□□□□ -0.41
SDC3-203ENST00000471567 ESM1Q9NQ30 184 aa12.48□□□□□ -0.41
SDC3-203ENST00000471567 TXNL4BQ9NX01 149 aaKnown RBP12.48□□□□□ -0.41
SDC3-203ENST00000471567 ZNF581Q9P0T4 197 aa12.48□□□□□ -0.41
SDC3-203ENST00000471567 KIF25Q9UIL4 384 aa12.48□□□□□ -0.41
SDC3-203ENST00000471567 FAM96BQ9Y3D0 163 aa12.48□□□□□ -0.41
SDC3-203ENST00000471567 SESN1Q9Y6P5 492 aa12.48□□□□□ -0.41
SDC3-203ENST00000471567 CUBNO60494 3623 aa12.48□□□□□ -0.41
SDC3-203ENST00000471567 MEIKINA0A087WXM9 373 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 A0A0U1RQK1 487 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 MEX3AA1L020 520 aaKnown RBP12.47□□□□□ -0.41
SDC3-203ENST00000471567 ZNF729A6NN14 1252 aaPredicted RBP12.47□□□□□ -0.41
SDC3-203ENST00000471567 RNF212BA8MTL3 300 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 TMEM14DPA8MWL7 114 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 MCRIP1C9JLW8 97 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 CLPXO76031 633 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 MPIG6BO95866 241 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 CGB3P0DN86 165 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 CGB7P0DN87 165 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 ARSBP15848 533 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 FUT3P21217 361 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 CFPP27918 469 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 RPS27AP62979 156 aaKnown RBP12.47□□□□□ -0.41
SDC3-203ENST00000471567 QRFPP83859 136 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 SRSF2Q01130 221 aaKnown RBP12.47□□□□□ -0.41
SDC3-203ENST00000471567 KRTAP24-1Q3LI83 254 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 OR52W1Q6IF63 320 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 HEPN1Q6WQI6 88 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 ZNF782Q6ZMW2 699 aaPredicted RBP12.47□□□□□ -0.41
SDC3-203ENST00000471567 OR2W3Q7Z3T1 314 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 PNKDQ8N490 385 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 FAM46BQ96A09 425 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 MDFIQ99750 246 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 TM2D1Q9BX74 207 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 TMEM59Q9BXS4 323 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 ING3Q9NXR8 418 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 FBLN5Q9UBX5 448 aa12.47□□□□□ -0.41
SDC3-203ENST00000471567 MDFIC2A0A1B0GVS7 189 aa12.46□□□□□ -0.41
SDC3-203ENST00000471567 A0A1W2PRD5 423 aa12.46□□□□□ -0.41
SDC3-203ENST00000471567 A0A1W2PRF3 423 aa12.46□□□□□ -0.41
SDC3-203ENST00000471567 A0A1W2PRM7 423 aa12.46□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms