RNA–Protein interactions for RNA: ENST00000471342.1

SF3A1-207, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 459 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-207ENST00000471342 Q6ZTK2 550 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 SNX29P2Q8IUI4 249 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 OR8H2Q8N162 312 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 ZNF561Q8N587 486 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 GVQW1Q8N7I0 195 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 CHST4Q8NCG5 386 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 OR56B1Q8NGI3 324 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 C8orf46Q8TAG6 207 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 CORO2AQ92828 525 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 RAB3CQ96E17 227 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 PPA2Q9H2U2 334 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 MYOZ1Q9NP98 299 aaPredicted RBP8.16□□□□□ -1.1
SF3A1-207ENST00000471342 C19orf12Q9NSK7 152 aa8.16□□□□□ -1.1
SF3A1-207ENST00000471342 UBE2QL1A1L167 161 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 LRRC30A6NM36 301 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 NPIPB11E5RHQ5 1161 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 NDUFS8O00217 210 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 SH2D1BO14796 132 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 ADAM20O43506 726 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 OR7C1O76099 320 aaPredicted RBP8.15□□□□□ -1.1
SF3A1-207ENST00000471342 CSTBP04080 98 aaKnown RBP8.15□□□□□ -1.1
SF3A1-207ENST00000471342 CSF3P09919 207 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 RCC1P18754 421 aaPredicted RBP8.15□□□□□ -1.1
SF3A1-207ENST00000471342 DNASE1P24855 282 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 AESQ08117 197 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 IKZF1Q13422 519 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 ZNF273Q14593 569 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 Q5PR19 223 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 TMEM200BQ69YZ2 307 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 SLC35E4Q6ICL7 350 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 HCP5Q6MZN7 132 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 MZT2AQ6P582 158 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 Q6ZS49 121 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 C1orf87Q8N0U7 546 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 Q8N7P7 452 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 OR13A1Q8NGR1 328 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 OR52I2Q8NH67 350 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 NUDCD2Q8WVJ2 157 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 FAM168AQ92567 244 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 MRGPRFQ96AM1 343 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 OCSTAMPQ9BR26 566 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 URM1Q9BTM9 101 aaKnown RBP8.15□□□□□ -1.1
SF3A1-207ENST00000471342 FAM234AQ9H0X4 552 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 ZNF665Q9H7R5 613 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 BARX1Q9HBU1 254 aaPredicted RBP8.15□□□□□ -1.1
SF3A1-207ENST00000471342 Q9N2K0 584 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 MMP26Q9NRE1 261 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 KLK11Q9UBX7 282 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 OR14J1Q9UGF5 321 aa8.15□□□□□ -1.1
SF3A1-207ENST00000471342 ZNF230Q9UIE0 474 aaPredicted RBP8.15□□□□□ -1.1
SF3A1-207ENST00000471342 MAP1AP78559 2803 aaPredicted RBP8.15□□□□□ -1.11
SF3A1-207ENST00000471342 MAST4O15021 2626 aa8.15□□□□□ -1.11
SF3A1-207ENST00000471342 ZFHX3Q15911 3703 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 MEX3AA1L020 520 aaKnown RBP8.14□□□□□ -1.11
SF3A1-207ENST00000471342 HSPB6O14558 160 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 MGST3O14880 152 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 TMPRSS2O15393 492 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 PHF1O43189 567 aaPredicted RBP8.14□□□□□ -1.11
SF3A1-207ENST00000471342 NDUFA2O43678 99 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 ORC5O43913 435 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 FCGR3AP08637 254 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 GSTP1P09211 210 aaKnown RBP8.14□□□□□ -1.11
SF3A1-207ENST00000471342 ZNF735P0CB33 412 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 P2RX3P56373 397 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 LOXL1Q08397 574 aaPredicted RBP8.14□□□□□ -1.11
SF3A1-207ENST00000471342 ATXN7L3Q14CW9 347 aaPredicted RBP8.14□□□□□ -1.11
SF3A1-207ENST00000471342 SRSF7Q16629 238 aaKnown RBP eCLIP8.14□□□□□ -1.11
SF3A1-207ENST00000471342 LDLRAD2Q5SZI1 272 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 ZNF660Q6AZW8 331 aaPredicted RBP8.14□□□□□ -1.11
SF3A1-207ENST00000471342 C1orf229Q6ZS94 237 aaPredicted RBP8.14□□□□□ -1.11
SF3A1-207ENST00000471342 SMIM4Q8WVI0 70 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 RAB1CQ92928 201 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 TNFRSF14Q92956 283 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 S100A16Q96FQ6 103 aaKnown RBP8.14□□□□□ -1.11
SF3A1-207ENST00000471342 DIRAS2Q96HU8 199 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 DNAJB11Q9UBS4 358 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 MTFP1Q9UDX5 166 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 KIF25Q9UIL4 384 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 ITPR3Q14573 2671 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 ANKRD17O75179 2603 aaKnown RBP8.14□□□□□ -1.11
SF3A1-207ENST00000471342 ARHGAP32A7KAX9 2087 aa8.14□□□□□ -1.11
SF3A1-207ENST00000471342 FABP12A6NFH5 140 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 SERPINE3A8MV23 424 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 J3QRK9 145 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 PLA2G10O15496 165 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 RGS5O15539 181 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 AVPP01185 164 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 MMP9P14780 707 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 ZNF44P15621 663 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 PTBP1P26599 531 aaKnown RBP eCLIP8.13□□□□□ -1.11
SF3A1-207ENST00000471342 GABRA2P47869 451 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 DLX1P56177 255 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 LOXL3P58215 753 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 DSCR9P59020 149 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 IL13RA1P78552 427 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 SCN1BQ07699 218 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 KLF9Q13886 244 aaPredicted RBP8.13□□□□□ -1.11
SF3A1-207ENST00000471342 HMGN3Q15651 99 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 PNLIPRP3Q17RR3 467 aa8.13□□□□□ -1.11
SF3A1-207ENST00000471342 TUSC1Q2TAM9 212 aa8.13□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 32.8 ms