RNA–Protein interactions for RNA: ENST00000471167.1

PRPF40A-206, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 2

Gene PRPF40A, Length 333 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-206ENST00000471167 RBFOX3A6NFN3 312 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 EIF1BO60739 113 aaKnown RBP3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 RDH16O75452 317 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 REM1O75628 298 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 STK16O75716 305 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 SULT1C4O75897 302 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 REG1AP05451 166 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 CRYGDP07320 174 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 IL3P08700 152 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 MMP7P09237 267 aaPredicted RBP3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 H2AFZP0C0S5 128 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 SULT1A3P0DMM9 295 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 SULT1A4P0DMN0 295 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 IGKV1-13P0DP09 117 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 COX4I1P13073 169 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 OGNP20774 298 aaKnown RBP3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 S100PP25815 95 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 PAX6P26367 422 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 S100A7P31151 101 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 EIF1P41567 113 aaKnown RBP3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 AKR1C3P42330 323 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 MEOX2P50222 304 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 RIPPLY3P57055 190 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 RAP1BP61224 184 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 RHOBP62745 196 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 DYNLL1P63167 89 aaKnown RBP3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 HBG1P69891 147 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 HBG2P69892 147 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 ACOT6Q3I5F7 207 aaPredicted RBP3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 C14orf28Q4W4Y0 310 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 TMEM128Q5BJH2 165 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 TTC32Q5I0X7 151 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 KRTAP5-2Q701N4 177 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 SLC16A13Q7RTY0 426 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 NAA40Q86UY6 237 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 PPP1R27Q86WC6 154 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 ANGPTL5Q86XS5 388 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 ZBTB8OSQ8IWT0 167 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 ZNF439Q8NDP4 499 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 LRRC29Q8WV35 223 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 SRSF12Q8WXF0 261 aaKnown RBP3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 EXOSC8Q96B26 276 aaKnown RBP3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 DIRAS2Q96HU8 199 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 BTN2A3PQ96KV6 586 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 MARVELD1Q9BSK0 173 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 SUCNR1Q9BXA5 334 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 SELENOIQ9C0D9 397 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 OR51E2Q9H255 320 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 ZSCAN16Q9H4T2 348 aaPredicted RBP3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 DMAC2Q9NW81 257 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 TAS2R5Q9NYW4 299 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 ORC6Q9Y5N6 252 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 KCNE3Q9Y6H6 103 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 PTPRGP23470 1445 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 CNTLNQ9NXG0 1405 aa3.41□□□□□ -1.86
PRPF40A-206ENST00000471167 IGHV3OR16-12A0A075B7B8 117 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 A0A0B4J2A0 478 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 A0A0G2JRQ6 117 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 KLF18A0A0U1RQI7 1052 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 BTNL10A8MVZ5 291 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 FAM220BPB1ANY3 271 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 C12orf77C9JDV5 145 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 K7ENP7 123 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 SLC17A3O00476 420 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 XKRYO14609 159 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 OR2J2O76002 312 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 SOGA1O94964 1423 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 GKN3PP0CG01 181 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 OR5H8P0DN80 308 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 ZNF708P17019 499 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 CXCL3P19876 107 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 GABRR1P24046 479 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 ERP29P30040 261 aaKnown RBP3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 DRD3P35462 400 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 GGT2P36268 569 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 KIR2DS2P43631 304 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 KLK7P49862 253 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 ZNF133P52736 654 aaPredicted RBP3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 TPI1P60174 286 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 CACNG7P62955 275 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 DEFA6Q01524 100 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 CNPY1Q3B7I2 92 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 ZNF684Q5T5D7 378 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 AVPI1Q5T686 147 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 SAMD13Q5VXD3 122 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 TEX36Q5VZQ5 186 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 OPN5Q6U736 354 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 UGT2A3Q6UWM9 527 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 C3orf62Q6ZUJ4 267 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 PEX26Q7Z412 305 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 ZNF567Q8N184 647 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 NPWQ8N729 165 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 OR9I1Q8NGQ6 314 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 CHCHD10Q8WYQ3 142 aaPredicted RBP3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 IL22RA2Q969J5 263 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 SEH1LQ96EE3 360 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 L3HYPDHQ96EM0 354 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 FAM19A4Q96LR4 140 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 LINC00167Q96N53 147 aa3.4□□□□□ -1.87
PRPF40A-206ENST00000471167 PPP1R2P1Q96PQ5 205 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms