RNA–Protein interactions for RNA: ENST00000470652.1

COL9A1-206, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 531 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-206ENST00000470652 ITLN1Q8WWA0 313 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 RGP1Q92546 391 aaPredicted RBP3.07□□□□□ -1.92
COL9A1-206ENST00000470652 TMIGD2Q96BF3 282 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 SLAMF6Q96DU3 332 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 C4orf36Q96KX1 117 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 RCHY1Q96PM5 261 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 RBP7Q96R05 134 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 LINC00470Q9BZP3 86 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 OR2H1Q9GZK4 316 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 CCDC90BQ9GZT6 254 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 RACGAP1Q9H0H5 632 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 LIME1Q9H400 295 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 RNF167Q9H6Y7 350 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 ELOVL3Q9HB03 270 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 SLC17A5Q9NRA2 495 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 GPR173Q9NS66 373 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 CENPMQ9NSP4 180 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 FKBP14Q9NWM8 211 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 MYEF2Q9P2K5 600 aaKnown RBP3.07□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF629Q9UEG4 869 aaPredicted RBP3.07□□□□□ -1.92
COL9A1-206ENST00000470652 MRM2Q9UI43 246 aaKnown RBP3.07□□□□□ -1.92
COL9A1-206ENST00000470652 PSORS1C1Q9UIG5 152 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 KLHL21Q9UJP4 597 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 RAB26Q9ULW5 256 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 MGAT4AQ9UM21 535 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 POLR1DQ9Y2S0 133 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 LRRC42Q9Y546 428 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 SLC25A15Q9Y619 301 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 FKBP7Q9Y680 259 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 HECTD1Q9ULT8 2610 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 CENPEQ02224 2701 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 USF3Q68DE3 2245 aa3.07□□□□□ -1.92
COL9A1-206ENST00000470652 ANKHD1Q8IWZ3 2542 aaKnown RBP3.07□□□□□ -1.92
COL9A1-206ENST00000470652 A0A1B0GUH1 482 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 C5orf49A4QMS7 147 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 OR5H1A6NKK0 313 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 DEFB108AA8MXU0 73 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 F5H5K5 113 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 RPL36A-HNRNPH2H7BZ11 118 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 J3QLW9 94 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 LY6HO94772 140 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 CDK1P06493 297 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 LYNP07948 512 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF14P17017 642 aaPredicted RBP3.06□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF19P17023 458 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 ALOX5APP20292 161 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 MSR1P21757 451 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 PAICSP22234 425 aaKnown RBP3.06□□□□□ -1.92
COL9A1-206ENST00000470652 ACKR3P25106 362 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 FKBP2P26885 142 aaKnown RBP3.06□□□□□ -1.92
COL9A1-206ENST00000470652 MPV17P39210 176 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 HTR5AP47898 357 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 CX3CR1P49238 355 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF121P58317 390 aaPredicted RBP3.06□□□□□ -1.92
COL9A1-206ENST00000470652 RPS25P62851 125 aaKnown RBP3.06□□□□□ -1.92
COL9A1-206ENST00000470652 RPS27AP62979 156 aaKnown RBP3.06□□□□□ -1.92
COL9A1-206ENST00000470652 SLC35A2P78381 396 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 BSPH1Q075Z2 132 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 GGTLC2Q14390 218 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 NEDD8Q15843 81 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 THEM4Q5T1C6 240 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF684Q5T5D7 378 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 FAM27D1Q5T7N8 215 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 TTC23Q5W5X9 447 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 ASPHD2Q6ICH7 369 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF322Q6U7Q0 402 aaPredicted RBP3.06□□□□□ -1.92
COL9A1-206ENST00000470652 SLC16A14Q7RTX9 510 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 BATF2Q8N1L9 274 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 ZNF540Q8NDQ6 660 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 OR51A4Q8NGJ6 313 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 RORBQ92753 470 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 RNASE6Q93091 150 aaKnown RBP3.06□□□□□ -1.92
COL9A1-206ENST00000470652 POP5Q969H6 163 aaKnown RBP3.06□□□□□ -1.92
COL9A1-206ENST00000470652 PELI1Q96FA3 418 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 PIK3IP1Q96FE7 263 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 RDH12Q96NR8 316 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 CSMD1Q96PZ7 3565 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 CNN2Q99439 309 aaKnown RBP3.06□□□□□ -1.92
COL9A1-206ENST00000470652 PDCD1LG2Q9BQ51 273 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 FGF23Q9GZV9 251 aaPredicted RBP3.06□□□□□ -1.92
COL9A1-206ENST00000470652 NAA50Q9GZZ1 169 aaKnown RBP3.06□□□□□ -1.92
COL9A1-206ENST00000470652 VCXQ9H320 206 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 KCNJ16Q9NPI9 418 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 CLN6Q9NWW5 311 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 PAQR5Q9NXK6 330 aaPredicted RBP3.06□□□□□ -1.92
COL9A1-206ENST00000470652 PLEK2Q9NYT0 353 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 PTTG3PQ9NZH4 202 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 CYB5R1Q9UHQ9 305 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 GNG8Q9UK08 70 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 IKZF2Q9UKS7 526 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 GPR132Q9UNW8 380 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 MOKQ9UQ07 419 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 BAIAP2Q9UQB8 552 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 LSM2Q9Y333 95 aaKnown RBP3.06□□□□□ -1.92
COL9A1-206ENST00000470652 POMT1Q9Y6A1 747 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 ABCA12Q86UK0 2595 aa3.06□□□□□ -1.92
COL9A1-206ENST00000470652 ARHGAP32A7KAX9 2087 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 APCP25054 2843 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 IGHV2OR16-5A0A0B4J2B6 119 aa3.05□□□□□ -1.92
COL9A1-206ENST00000470652 LOC390937A0A1W2PQ73 354 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 45.4 ms