RNA–Protein interactions for RNA: ENST00000470268.1

SF3B1-208, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 2,003 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-208ENST00000470268 ERVK11-1P61568 191 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 DGCR2P98153 550 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 IL24Q13007 206 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 NDUFA5Q16718 116 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 C2orf76Q3KRA6 126 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 SLC22A6Q4U2R8 563 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 PLA1AQ53H76 456 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 AWAT2Q6E213 333 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 C1orf122Q6ZSJ8 110 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF573Q86YE8 665 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 LINC00469Q8N7U9 141 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 PXT1Q8NFP0 134 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 OR51F2Q8NH61 342 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 AP3S1Q92572 193 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 YIPF5Q969M3 257 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 FAM46BQ96A09 425 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 FAM3DQ96BQ1 224 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 PKIBQ9C010 78 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 BANF2Q9H503 90 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 AUNIPQ9H7T9 357 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 C1orf123Q9NWV4 160 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 ING4Q9UNL4 249 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 PPP1R3CQ9UQK1 317 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 RBMX2Q9Y388 322 aaKnown RBP3.95□□□□□ -1.78
SF3B1-208ENST00000470268 TACC2O95359 2948 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 A0A0A6YYD4 124 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 TMEM272A0A1B0GTI8 110 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 hCG_1807616A0A1W2PRN6 198 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 SRRM5B3KS81 715 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 RP2O75695 350 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 KDM4BO94953 1096 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 LHBP01229 141 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 IGHV4-39P01824 125 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 ARSBP15848 533 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 SERPINA2P20848 420 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 DUSP1P28562 367 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 CFHR2P36980 270 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 NKX2-5P52952 324 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-208ENST00000470268 RAB25P57735 213 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 DYRK1AQ13627 763 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 KCNJ8Q15842 424 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 RAB11BQ15907 218 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 PCGF3Q3KNV8 242 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 PIGYQ3MUY2 71 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 MOGAT2Q3SYC2 334 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 SFRP4Q6FHJ7 346 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-208ENST00000470268 FAAP20Q6NZ36 180 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 PNLDC1Q8NA58 520 aaKnown RBP3.95□□□□□ -1.78
SF3B1-208ENST00000470268 ZSCAN4Q8NAM6 433 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-208ENST00000470268 Q8NFD4 153 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF671Q8TAW3 534 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 LRRC29Q8WV35 223 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 CCL17Q92583 94 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 CCL19Q99731 98 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 NRIP2Q9BQI9 281 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 NICN1Q9BSH3 213 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 CCDC32Q9BV29 185 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 NEK6Q9HC98 313 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 HES4Q9HCC6 221 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 DECR2Q9NUI1 292 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 ELF5Q9UKW6 265 aaPredicted RBP3.95□□□□□ -1.78
SF3B1-208ENST00000470268 SPATA2Q9UM82 520 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 PLEKHA6Q9Y2H5 1048 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 NOP16Q9Y3C1 178 aaKnown RBP3.95□□□□□ -1.78
SF3B1-208ENST00000470268 ARFGEF3Q5TH69 2177 aa3.95□□□□□ -1.78
SF3B1-208ENST00000470268 IGHV1-69-2A0A0G2JMI3 117 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 MEIOCA2RUB1 952 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 TMEM178BH3BS89 294 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 NOS1APO75052 506 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 CRTAPO75718 401 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 ACAA1P09110 424 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 MGMTP16455 207 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 CEBPDP49716 269 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 SNU13P55769 128 aaKnown RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 KRTAP1-1Q07627 177 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 SIGIRRQ6IA17 410 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 ELP2Q6IA86 826 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 MKXQ8IYA7 352 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 SAXO1Q8IYX7 474 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 POC1AQ8NBT0 407 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 TRIM63Q969Q1 353 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 ERGIC1Q969X5 290 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 RBM14Q96PK6 669 aaKnown RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 BEX2Q9BXY8 128 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 EGLN1Q9GZT9 426 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 RAB1BQ9H0U4 201 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 METTL9Q9H1A3 318 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 LPAR5Q9H1C0 372 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 FN3KRPQ9HA64 309 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 ELL3Q9HB65 397 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 TMEM106BQ9NUM4 274 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 ZNF701Q9NV72 531 aaPredicted RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 IL36GQ9NZH8 169 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 ABRACLQ9P1F3 81 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 NLKQ9UBE8 527 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 RNF7Q9UBF6 113 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 POLDIP2Q9Y2S7 368 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 ASH1LQ9NR48 2969 aaKnown RBP3.94□□□□□ -1.78
SF3B1-208ENST00000470268 IGHV3OR15-7A0A075B7D8 119 aa3.94□□□□□ -1.78
SF3B1-208ENST00000470268 A0A1B0GW55 424 aa3.94□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 50.7 ms