RNA–Protein interactions for RNA: ENST00000470191.5

CCDC171-204, Transcript of coiled-coil domain containing 171, humanhuman

TSL 1 (best)

Gene CCDC171, Length 838 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC171-204ENST00000470191 TMEM14AQ9Y6G1 99 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 SORL1Q92673 2214 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 STARD9Q9P2P6 4700 aa7.1□□□□□ -1.27
CCDC171-204ENST00000470191 HYDINQ4G0P3 5121 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 TRAV39A0A0B4J263 110 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 TCRBV5S2A0A599 114 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 ZNF670-ZNF695F2Z2N8 137 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 LDLRAD4O15165 306 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 RRP9O43818 475 aaKnown RBP7.09□□□□□ -1.27
CCDC171-204ENST00000470191 E2F6O75461 281 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 GATBO75879 557 aaKnown RBP7.09□□□□□ -1.27
CCDC171-204ENST00000470191 SERPINA3P01011 423 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 OR8U8P0C7N1 319 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 PRKACGP22612 351 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 RAB7AP51149 207 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 SLURP1P55000 103 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 MTCP1P56278 107 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 CDC42P60953 191 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 ACTR3P61158 418 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 CDK5Q00535 292 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 FHL3Q13643 280 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 TMEM65Q6PI78 240 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 ZNF429Q86V71 674 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 DEFB107AQ8IZN7 70 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 HS3ST5Q8IZT8 346 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 PGAM4Q8N0Y7 254 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 OR8H3Q8N146 312 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 Q8N9W7 124 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 OR5D18Q8NGL1 313 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 OR13A1Q8NGR1 328 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 CNN2Q99439 309 aaKnown RBP7.09□□□□□ -1.27
CCDC171-204ENST00000470191 RASL11BQ9BPW5 248 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 ELAC2Q9BQ52 826 aaKnown RBP7.09□□□□□ -1.27
CCDC171-204ENST00000470191 TM2D3Q9BRN9 247 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 ALX4Q9H161 411 aaPredicted RBP7.09□□□□□ -1.27
CCDC171-204ENST00000470191 KLK15Q9H2R5 256 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 LIN7CQ9NUP9 197 aaKnown RBP7.09□□□□□ -1.27
CCDC171-204ENST00000470191 CALYQ9NYX4 217 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 IDI2-AS1Q9NZ38 188 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 MRM2Q9UI43 246 aaKnown RBP7.09□□□□□ -1.27
CCDC171-204ENST00000470191 KIF25Q9UIL4 384 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 WSB1Q9Y6I7 421 aa7.09□□□□□ -1.27
CCDC171-204ENST00000470191 MEIKINA0A087WXM9 373 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 A0A087X0M5 115 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 IGHV1-3A0A0C4DH29 117 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 IGKV1-12A0A0C4DH73 117 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 KBTBD11-OT1A0A1B0GTJ5 212 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 A0A1B0GX30 115 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 RBMY1BA6NDE4 496 aaKnown RBP7.08□□□□□ -1.28
CCDC171-204ENST00000470191 RBMY1EA6NEQ0 496 aaKnown RBP7.08□□□□□ -1.28
CCDC171-204ENST00000470191 DHRS7CA6NNS2 312 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 SLC33A1O00400 549 aaPredicted RBP7.08□□□□□ -1.28
CCDC171-204ENST00000470191 GNGT2O14610 69 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 HSD17B6O14756 317 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 DEGS1O15121 323 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 CST1P01037 141 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 IGKV1D-12P01611 117 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 IGHG4P01861 327 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 RBMY1DP0C7P1 496 aaKnown RBP7.08□□□□□ -1.28
CCDC171-204ENST00000470191 OCM2P0CE71 109 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 OCMP0CE72 109 aaPredicted RBP7.08□□□□□ -1.28
CCDC171-204ENST00000470191 IGHV4-30-4P0DP06 118 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 OSMP13725 252 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 MYF6P23409 242 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 PRDX6P30041 224 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 FAM98BQ52LJ0 330 aaKnown RBP7.08□□□□□ -1.28
CCDC171-204ENST00000470191 LHFPL2Q6ZUX7 228 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 SSX6Q7RTT6 188 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 TGIF2LXQ8IUE1 241 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 RDH10Q8IZV5 341 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 UBALD1Q8TB05 177 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 HAVCR2Q8TDQ0 301 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 MRGPRDQ8TDS7 321 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 DLX4Q92988 240 aaPredicted RBP7.08□□□□□ -1.28
CCDC171-204ENST00000470191 KCTD7Q96MP8 289 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 NR1H4Q96RI1 486 aaPredicted RBP7.08□□□□□ -1.28
CCDC171-204ENST00000470191 CHST5Q9GZS9 411 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 FAM107BQ9H098 131 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 CCDC134Q9H6E4 229 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 ZNF556Q9HAH1 456 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 SEBOXQ9HB31 216 aaPredicted RBP7.08□□□□□ -1.28
CCDC171-204ENST00000470191 OR6C3Q9NZP0 311 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 ACTR3BQ9P1U1 418 aa7.08□□□□□ -1.28
CCDC171-204ENST00000470191 IGKV1-9A0A0C4DH69 117 aa7.07□□□□□ -1.28
CCDC171-204ENST00000470191 LOC107986453A0A1B0GWG9 222 aa7.07□□□□□ -1.28
CCDC171-204ENST00000470191 ZNF736B4DX44 427 aaPredicted RBP7.07□□□□□ -1.28
CCDC171-204ENST00000470191 I3L521 148 aa7.07□□□□□ -1.28
CCDC171-204ENST00000470191 MPZL2O60487 215 aa7.07□□□□□ -1.28
CCDC171-204ENST00000470191 APOL3O95236 402 aa7.07□□□□□ -1.28
CCDC171-204ENST00000470191 GAPDHP04406 335 aaKnown RBP7.07□□□□□ -1.28
CCDC171-204ENST00000470191 KRT8P05787 483 aa7.07□□□□□ -1.28
CCDC171-204ENST00000470191 SLC2A2P11168 524 aaPredicted RBP7.07□□□□□ -1.28
CCDC171-204ENST00000470191 CCL1P22362 96 aa7.07□□□□□ -1.28
CCDC171-204ENST00000470191 PSMB8P28062 276 aa7.07□□□□□ -1.28
CCDC171-204ENST00000470191 CFHR3Q02985 330 aa7.07□□□□□ -1.28
CCDC171-204ENST00000470191 PDZK1IP1Q13113 114 aa7.07□□□□□ -1.28
CCDC171-204ENST00000470191 Q6P435 159 aa7.07□□□□□ -1.28
CCDC171-204ENST00000470191 Q6ZSR3 168 aa7.07□□□□□ -1.28
CCDC171-204ENST00000470191 ZNF491Q8N8L2 437 aa7.07□□□□□ -1.28
CCDC171-204ENST00000470191 RNF152Q8N8N0 203 aa7.07□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms