RNA–Protein interactions for RNA: ENST00000469687.2

CBWD3-205, Transcript of COBW domain containing 3, humanhuman

TSL 1 (best)

Gene CBWD3, Length 2,195 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-205ENST00000469687 EIF5AP63241 154 aaKnown RBP12.54□□□□□ -0.4
CBWD3-205ENST00000469687 PMP22Q01453 160 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 NHLH2Q02577 135 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 PLP2Q04941 152 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 C10orf91Q5T1B1 145 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 OR2T2Q6IF00 324 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 Q6ZRG5 221 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 TBC1D26Q86UD7 250 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 MDP1Q86V88 176 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 SAXO1Q8IYX7 474 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 GAPTQ8N292 157 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 SVBPQ8N300 66 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 CCDC71LQ8N9Z2 235 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 SUMF1Q8NBK3 374 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 DMBX1Q8NFW5 382 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 OR1K1Q8NGR3 316 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 WDYHV1Q96HA8 205 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 PLEKHA2Q9HB19 425 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 PLSCR2Q9NRY7 297 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 LAMA5O15230 3695 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 GTF3C1Q12789 2109 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 DMXL1Q9Y485 3027 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 SLC22A20A6NK97 555 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 C9JQL5 133 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 ATP6V1G2-DDX39BF2Z307 99 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 IL32P24001 234 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 APLNRP35414 380 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 CAV2P51636 162 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 CLN3Q13286 438 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 BTNL8Q6UX41 500 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 DPPA2Q7Z7J5 298 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 SUMF2Q8NBJ7 301 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 OR5A2Q8NGI9 324 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 OR4D5Q8NGN0 318 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 RDH5Q92781 318 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 LOXL4Q96JB6 756 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 FER1L6-AS2Q96M78 137 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 NRIP2Q9BQI9 281 aa12.54□□□□□ -0.4
CBWD3-205ENST00000469687 HSD17B6O14756 317 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 CELA3BP08861 270 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 OR8U9P0C7N5 309 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 CA6P23280 308 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 NPBWR1P48145 328 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 SRSF6Q13247 344 aaKnown RBP12.53□□□□□ -0.4
CBWD3-205ENST00000469687 MPV17LQ2QL34 196 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 EIF5AL1Q6IS14 154 aaKnown RBP12.53□□□□□ -0.4
CBWD3-205ENST00000469687 Q6ZS49 121 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 CBLN2Q8IUK8 224 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 MKXQ8IYA7 352 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 UBAC2Q8NBM4 344 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 CLRN3Q8NCR9 226 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 OR8U1Q8NH10 309 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 TMEM222Q9H0R3 208 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 FAM86C1Q9NVL1 165 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 KIAA2026Q5HYC2 2103 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 TRAV24A0A0B4J272 114 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 NUDT19A8MXV4 375 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 ST8SIA3O43173 380 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 TK1P04183 234 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 GLAP06280 429 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 CD46P15529 392 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 BCL2L2Q92843 193 aaPredicted RBP12.53□□□□□ -0.4
CBWD3-205ENST00000469687 HIST1H2AAQ96QV6 131 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 SH3BGRL3Q9H299 93 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 FBXO9Q9UK97 447 aaPredicted RBP12.53□□□□□ -0.4
CBWD3-205ENST00000469687 CARHSP1Q9Y2V2 147 aaKnown RBP12.53□□□□□ -0.4
CBWD3-205ENST00000469687 BOD1L1Q8NFC6 3051 aa12.53□□□□□ -0.4
CBWD3-205ENST00000469687 CACNA1HO95180 2353 aa12.52□□□□□ -0.4
CBWD3-205ENST00000469687 MED19A0JLT2 244 aaPredicted RBP12.52□□□□□ -0.4
CBWD3-205ENST00000469687 ANKRD30BLA7E2S9 258 aa12.52□□□□□ -0.4
CBWD3-205ENST00000469687 TNFSF12O43508 249 aa12.52□□□□□ -0.4
CBWD3-205ENST00000469687 GPR137BO60478 399 aa12.52□□□□□ -0.4
CBWD3-205ENST00000469687 WISP2O76076 250 aa12.52□□□□□ -0.4
CBWD3-205ENST00000469687 FHITP49789 147 aa12.52□□□□□ -0.4
CBWD3-205ENST00000469687 ARG2P78540 354 aa12.52□□□□□ -0.4
CBWD3-205ENST00000469687 ZNF766Q5HY98 468 aa12.52□□□□□ -0.4
CBWD3-205ENST00000469687 FBXW9Q5XUX1 488 aa12.52□□□□□ -0.4
CBWD3-205ENST00000469687 MRPL30Q8TCC3 161 aaKnown RBP12.52□□□□□ -0.4
CBWD3-205ENST00000469687 CCL28Q9NRJ3 127 aa12.52□□□□□ -0.4
CBWD3-205ENST00000469687 TMED3Q9Y3Q3 217 aa12.52□□□□□ -0.4
CBWD3-205ENST00000469687 TRGV5A0A0B4J1U4 118 aa12.52□□□□□ -0.41
CBWD3-205ENST00000469687 IGHV3-64DA0A0J9YX35 117 aa12.52□□□□□ -0.41
CBWD3-205ENST00000469687 TRDCB7Z8K6 153 aa12.52□□□□□ -0.41
CBWD3-205ENST00000469687 C1QL1O75973 258 aa12.52□□□□□ -0.41
CBWD3-205ENST00000469687 CD80P33681 288 aa12.52□□□□□ -0.41
CBWD3-205ENST00000469687 POLR2GP62487 172 aaKnown RBP eCLIP12.52□□□□□ -0.41
CBWD3-205ENST00000469687 ZNF565Q8N9K5 539 aa12.52□□□□□ -0.41
CBWD3-205ENST00000469687 LILRB1Q8NHL6 650 aaPredicted RBP12.52□□□□□ -0.41
CBWD3-205ENST00000469687 POM121Q96HA1 1249 aa12.52□□□□□ -0.41
CBWD3-205ENST00000469687 SEC11CQ9BY50 192 aa12.52□□□□□ -0.41
CBWD3-205ENST00000469687 ARV1Q9H2C2 271 aa12.52□□□□□ -0.41
CBWD3-205ENST00000469687 PARP11Q9NR21 331 aa12.52□□□□□ -0.41
CBWD3-205ENST00000469687 PURGQ9UJV8 347 aaKnown RBP12.52□□□□□ -0.41
CBWD3-205ENST00000469687 UBE2J1Q9Y385 318 aaPredicted RBP12.52□□□□□ -0.41
CBWD3-205ENST00000469687 RFNGQ9Y644 331 aa12.52□□□□□ -0.41
CBWD3-205ENST00000469687 ATP23Q9Y6H3 246 aa12.52□□□□□ -0.41
CBWD3-205ENST00000469687 TRAV39A0A0B4J263 110 aa12.51□□□□□ -0.41
CBWD3-205ENST00000469687 RNASEK-C17orf49H0YIS7 233 aa12.51□□□□□ -0.41
CBWD3-205ENST00000469687 SLC33A1O00400 549 aaPredicted RBP12.51□□□□□ -0.41
CBWD3-205ENST00000469687 TUSC2O75896 110 aa12.51□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms