RNA–Protein interactions for RNA: ENST00000469535.5

CD46-212, Transcript of CD46 molecule, humanhuman

TSL 1 (best)

Gene CD46, Length 7,826 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-212ENST00000469535 FABP4P15090 132 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 PTBP1P26599 531 aaKnown RBP eCLIP6.18□□□□□ -1.421e-8■■□□□ 11.8
CD46-212ENST00000469535 ARF6P62330 175 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 NHLH1Q02575 133 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 NHLH2Q02577 135 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 IZUMO4Q1ZYL8 232 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 UNQ5815/PRO19632Q6UWF5 114 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 TBC1D26Q86UD7 250 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 RELL2Q8NC24 303 aaPredicted RBP6.18□□□□□ -1.42
CD46-212ENST00000469535 ZNF385AQ96PM9 386 aaKnown RBP6.18□□□□□ -1.42
CD46-212ENST00000469535 METTL26Q96S19 204 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 C12orf10Q9HB07 376 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 RASL12Q9NYN1 266 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 GDF9O60383 454 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 CD37P11049 281 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 GZMHP20718 246 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 PRDX2P32119 198 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 PPP1CCP36873 323 aaKnown RBP6.18□□□□□ -1.42
CD46-212ENST00000469535 FGF8P55075 233 aaPredicted RBP6.18□□□□□ -1.42
CD46-212ENST00000469535 WNT3P56703 355 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 ST3GAL2Q16842 350 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 OR4B1Q8NGF8 309 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 OR5H6Q8NGV6 325 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 OR4X1Q8NH49 305 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 CXorf58Q96LI9 332 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 C16orf92Q96LL3 132 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 IL17BQ9UHF5 180 aa6.18□□□□□ -1.42
CD46-212ENST00000469535 CHST1O43916 411 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 SS18L1O75177 396 aaPredicted RBP6.17□□□□□ -1.42
CD46-212ENST00000469535 HIST1H1EP10412 219 aaKnown RBP6.17□□□□□ -1.42
CD46-212ENST00000469535 GP2P55259 537 aaKnown RBP6.17□□□□□ -1.42
CD46-212ENST00000469535 UCP2P55851 309 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 TMEM97Q5BJF2 176 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 MESTQ5EB52 335 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 SLC25A42Q86VD7 318 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 TMEM116Q8NCL8 245 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 SSMEM1Q8WWF3 244 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 DYRK2Q92630 601 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 GDF15Q99988 308 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 TMSB15BA0A087X1C1 80 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 ADAM10O14672 748 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 MOSPD3O75425 235 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 KIR3DL2P43630 455 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 CAMPP49913 170 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 PIGYQ3MUY2 71 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 TEX30Q5JUR7 227 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 SSX8Q7RTT4 187 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 OR5C1Q8NGR4 320 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 ZNF721Q8TF20 911 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 METTL1Q9UBP6 276 aaKnown RBP6.17□□□□□ -1.42
CD46-212ENST00000469535 TRAV1-2A0A0B4J238 106 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 FAM24AA6NFZ4 105 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 NQO2P16083 231 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 INSL4Q14641 139 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 PCOLCEQ15113 449 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 LINC00303Q3SY05 128 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 FDX2Q6P4F2 183 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 STXBP6Q8NFX7 210 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 OR4P4Q8NGL7 312 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 MS4A3Q96HJ5 214 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 TGIF2Q9GZN2 237 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 LOC105371242A0A075B767 164 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 J3QT63 122 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 DAOP14920 347 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 WNT5AP41221 380 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 TIAL1Q01085 375 aaKnown RBP eCLIP6.17□□□□□ -1.428e-7■■■■□ 21
CD46-212ENST00000469535 LAMTOR1Q6IAA8 161 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 HSD17B13Q7Z5P4 300 aaPredicted RBP6.17□□□□□ -1.42
CD46-212ENST00000469535 DDB2Q92466 427 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 RBPMSQ93062 196 aaKnown RBP6.17□□□□□ -1.42
CD46-212ENST00000469535 GPR137Q96N19 417 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 SHANK3Q9BYB0 1731 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 TMEM229AB2RXF0 380 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 BMPR1BO00238 502 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 UPK3AO75631 287 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 GAPDHP04406 335 aaKnown RBP6.17□□□□□ -1.42
CD46-212ENST00000469535 CSN3P07498 182 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 BTG1P62324 171 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 PSG6Q00889 435 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 SLC35E4Q6ICL7 350 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 FDCSPQ8NFU4 85 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 NPAP1Q9NZP6 1156 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 SUMO1P63165 101 aaKnown RBP6.17□□□□□ -1.42
CD46-212ENST00000469535 FAM122BQ7Z309 247 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 FAM219AQ8IW50 185 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 GVQW1Q8N7I0 195 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 ZNF738Q8NE65 137 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 C2CD4CQ8TF44 421 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 RAB40CQ96S21 281 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 TIMP4Q99727 224 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 ZNF426Q9BUY5 554 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 NAA60Q9H7X0 242 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 TMED3Q9Y3Q3 217 aa6.17□□□□□ -1.42
CD46-212ENST00000469535 IGKV3OR2-268A0A0C4DH90 116 aa6.16□□□□□ -1.42
CD46-212ENST00000469535 PYCARD-AS1I3L0S3 204 aa6.16□□□□□ -1.42
CD46-212ENST00000469535 HSBP1O75506 76 aa6.16□□□□□ -1.42
CD46-212ENST00000469535 GABRB1P18505 474 aa6.16□□□□□ -1.42
CD46-212ENST00000469535 PEBP1P30086 187 aaKnown RBP6.16□□□□□ -1.42
CD46-212ENST00000469535 GALR1P47211 349 aa6.16□□□□□ -1.42
CD46-212ENST00000469535 LSM6P62312 80 aaKnown RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms