RNA–Protein interactions for RNA: ENST00000468925.1

SF3B1-207, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 510 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-207ENST00000468925 PEF1Q9UBV8 284 aaKnown RBP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 CLN8Q9UBY8 286 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 KLK13Q9UKR3 277 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 HHLA2Q9UM44 414 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 LAMP3Q9UQV4 416 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 SLC22A13Q9Y226 551 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 TBL2Q9Y4P3 447 aaKnown RBP4.23□□□□□ -1.73
SF3B1-207ENST00000468925 TRAPPC1Q9Y5R8 145 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 PXMP4Q9Y6I8 212 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF780BQ9Y6R6 833 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 PTPRDP23468 1912 aa4.23□□□□□ -1.73
SF3B1-207ENST00000468925 SCN2AQ99250 2005 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 THSD7BQ9C0I4 1608 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 A0A0G2JN53 185 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 G3V4G9 280 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 DNPH1O43598 174 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 CD5LO43866 347 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 NPIPB7O75200 414 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF253O75346 499 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 KBTBD11O94819 623 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 NDUFB8O95169 186 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 C1orf105O95561 183 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 KLF8O95600 359 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-207ENST00000468925 RENP00797 406 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 IFNA5P01569 189 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 HMGN2P05204 90 aaKnown RBP4.22□□□□□ -1.73
SF3B1-207ENST00000468925 IGLC2P0DOY2 106 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 IGLC3P0DOY3 106 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 AK4P27144 223 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-207ENST00000468925 PPP1CCP36873 323 aaKnown RBP4.22□□□□□ -1.73
SF3B1-207ENST00000468925 CTRLP40313 264 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 MDH2P40926 338 aaKnown RBP4.22□□□□□ -1.73
SF3B1-207ENST00000468925 SLC6A8P48029 635 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 REG1BP48304 166 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 DNASE1L1P49184 302 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 PRLHRP49683 370 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 PPOXP50336 477 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 EFNB2P52799 333 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 EMP2P54851 167 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 FXYD6P3P58550 94 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 NANOS3P60323 173 aaKnown RBP4.22□□□□□ -1.73
SF3B1-207ENST00000468925 SNRPD1P62314 119 aaKnown RBP4.22□□□□□ -1.73
SF3B1-207ENST00000468925 TBPL1P62380 186 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 ROM1Q03395 351 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 TLE3Q04726 772 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 HYAL1Q12794 435 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 TCTEX1D4Q5JR98 221 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 OR10J3Q5JRS4 329 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 C9orf50Q5SZB4 431 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 GLYATL3Q5SZD4 288 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 LDLRAD2Q5SZI1 272 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 RAET1LQ5VY80 246 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 FAM90A2PQ658T7 463 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 OR4C11Q6IEV9 310 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 OR4A47Q6IF82 309 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 TMEM182Q6ZP80 229 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-207ENST00000468925 LGI3Q8N145 548 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 FBXL14Q8N1E6 418 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 Q8N1Y9 231 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 FAM89BQ8N5H3 189 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 TMEM217Q8N7C4 229 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 CHST4Q8NCG5 386 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 NPEPL1Q8NDH3 523 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 OR52R1Q8NGF1 315 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 OR10W1Q8NGF6 305 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 KCNG3Q8TAE7 436 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 ZNF519Q8TB69 540 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 DYRK2Q92630 601 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 STARD4Q96DR4 205 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 THOC3Q96J01 351 aaKnown RBP4.22□□□□□ -1.73
SF3B1-207ENST00000468925 GUCD1Q96NT3 240 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 TSPAN32Q96QS1 320 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 NKX3-1Q99801 234 aaPredicted RBP4.22□□□□□ -1.73
SF3B1-207ENST00000468925 ALG12Q9BV10 488 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 RAB11FIP5Q9BXF6 653 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 HCFC1R1Q9NWW0 138 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 LHX3Q9UBR4 397 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 COPS7AQ9UBW8 275 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 MRM2Q9UI43 246 aaKnown RBP4.22□□□□□ -1.73
SF3B1-207ENST00000468925 CD84Q9UIB8 345 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 PADI3Q9ULW8 664 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 DAPP1Q9UN19 280 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 PIN4Q9Y237 131 aaKnown RBP4.22□□□□□ -1.73
SF3B1-207ENST00000468925 LRP12Q9Y561 859 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 LIPGQ9Y5X9 500 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 FRMPD3Q5JV73 1810 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 RLFQ13129 1914 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 DOCK6Q96HP0 2047 aa4.22□□□□□ -1.73
SF3B1-207ENST00000468925 TRAV8-7A0A075B6U6 113 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 A0A0A6YYD5 115 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 A0A0B4J2E0 115 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 A0A1B0GX12 115 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 IGLC7A0M8Q6 106 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 GAGE12BA1L429 117 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 MBLAC1A4D2B0 266 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-207ENST00000468925 MEIS3P1A6NDR6 274 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 NPIPB15A6NHN6 443 aaPredicted RBP4.21□□□□□ -1.74
SF3B1-207ENST00000468925 CRYM-AS1A6NIL9 109 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 OVOL3O00110 214 aa4.21□□□□□ -1.74
SF3B1-207ENST00000468925 PLPP1O14494 284 aa4.21□□□□□ -1.74
Retrieved 100 of 20,778 RNA–protein pairs in 44.1 ms