RNA–Protein interactions for RNA: ENST00000468836.1

CLRN1-204, Transcript of clarin 1, humanhuman

TSL 3

Gene CLRN1, Length 722 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1-204ENST00000468836 CCDC90BQ9GZT6 254 aa10.56□□□□□ -0.72
CLRN1-204ENST00000468836 MEGF9Q9H1U4 602 aa10.56□□□□□ -0.72
CLRN1-204ENST00000468836 FKBP14Q9NWM8 211 aa10.56□□□□□ -0.72
CLRN1-204ENST00000468836 IL36GQ9NZH8 169 aa10.56□□□□□ -0.72
CLRN1-204ENST00000468836 FOXJ3Q9UPW0 622 aa10.56□□□□□ -0.72
CLRN1-204ENST00000468836 MRPS28Q9Y2Q9 187 aaKnown RBP10.56□□□□□ -0.72
CLRN1-204ENST00000468836 ZNF729A6NN14 1252 aaPredicted RBP10.55□□□□□ -0.72
CLRN1-204ENST00000468836 ODF3BA8MYP8 253 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 F2RL2O00254 374 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 CD1AP06126 327 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 IGFBP3P17936 291 aaPredicted RBP10.55□□□□□ -0.72
CLRN1-204ENST00000468836 PAX6P26367 422 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 HTR1DP28221 377 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 KCNJ3P48549 501 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 RELBQ01201 579 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 SPHARQ15513 63 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 ATAD3CQ5T2N8 411 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 MINOS1Q5TGZ0 78 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 LIAT1Q6ZQX7 453 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 RTN4RL2Q86UN3 420 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 MS4A15Q8N5U1 240 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 NKAIN3Q8N8D7 197 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 DTX3Q8N9I9 347 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 ZNF565Q8N9K5 539 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 ZNF485Q8NCK3 441 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 OR51T1Q8NGJ9 327 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 UFD1Q92890 307 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 MUL1Q969V5 352 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 TMED9Q9BVK6 235 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 TCF7L1Q9HCS4 588 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 PITPNC1Q9UKF7 332 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 HILPDAQ9Y5L2 63 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 MINOS1-NBL1R4GNA1 71 aa10.55□□□□□ -0.72
CLRN1-204ENST00000468836 TRAV8-7A0A075B6U6 113 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 TRBV5-7A0A0A0MS05 114 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 FAM172BPA6NC97 362 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 RGS10O43665 173 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 GPX5O75715 221 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 MYF6P23409 242 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 NFYBP25208 207 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 GABRA5P31644 462 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 RBM11P57052 281 aaKnown RBP10.54□□□□□ -0.72
CLRN1-204ENST00000468836 RPS11P62280 158 aaKnown RBP eCLIP10.54□□□□□ -0.72
CLRN1-204ENST00000468836 RBM39Q14498 530 aaKnown RBP10.54□□□□□ -0.72
CLRN1-204ENST00000468836 MPV17LQ2QL34 196 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 ARSJQ5FYB0 599 aaPredicted RBP10.54□□□□□ -0.72
CLRN1-204ENST00000468836 RBM48Q5RL73 367 aaKnown RBP10.54□□□□□ -0.72
CLRN1-204ENST00000468836 RNLSQ5VYX0 342 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 GLIPR1L1Q6UWM5 242 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 HEPN1Q6WQI6 88 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 Q6ZSV7 163 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 ABHD12Q8N2K0 398 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 LINC01006Q8NI28 216 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 CAPSLQ8WWF8 208 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 WFDC12Q8WWY7 111 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 CORO2AQ92828 525 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 COQ2Q96H96 371 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 CNBD2Q96M20 576 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 DERL3Q96Q80 235 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 DPCDQ9BVM2 203 aaPredicted RBP10.54□□□□□ -0.72
CLRN1-204ENST00000468836 CDCA4Q9BXL8 241 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 ANKRD60Q9BZ19 345 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 NPFFR1Q9GZQ6 430 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 PPIL3Q9H2H8 161 aaKnown RBP10.54□□□□□ -0.72
CLRN1-204ENST00000468836 KIF25Q9UIL4 384 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 BLOC1S6Q9UL45 172 aa10.54□□□□□ -0.72
CLRN1-204ENST00000468836 TRAV24A0A0B4J272 114 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 MEGF11A6BM72 1044 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 MAGEA13PA6NCF6 341 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 GEMIN2O14893 280 aaKnown RBP10.53□□□□□ -0.72
CLRN1-204ENST00000468836 HSMCR30P0CW71 290 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 CEACAM3P40198 252 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 PRRX1P54821 245 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 GPR50Q13585 617 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 ACSM3Q53FZ2 586 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 NHLRC3Q5JS37 347 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 ASCL4Q6XD76 172 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 CDH26Q8IXH8 852 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 SUMF2Q8NBJ7 301 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 OR2T6Q8NHC8 308 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 CREB3L1Q96BA8 519 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 OR5M11Q96RB7 305 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 SPACA1Q9HBV2 294 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 CALYQ9NYX4 217 aa10.53□□□□□ -0.72
CLRN1-204ENST00000468836 KBTBD11-OT1A0A1B0GTJ5 212 aa10.52□□□□□ -0.73
CLRN1-204ENST00000468836 TMEM30CPA0ZSE6 113 aa10.52□□□□□ -0.73
CLRN1-204ENST00000468836 FAM90A8PA6NJQ4 464 aa10.52□□□□□ -0.73
CLRN1-204ENST00000468836 VGLL3A8MV65 326 aa10.52□□□□□ -0.73
CLRN1-204ENST00000468836 CRTAPO75718 401 aaPredicted RBP10.52□□□□□ -0.73
CLRN1-204ENST00000468836 MMP23AO75900 390 aa10.52□□□□□ -0.73
CLRN1-204ENST00000468836 SLC35A2P78381 396 aa10.52□□□□□ -0.73
CLRN1-204ENST00000468836 LTC4SQ16873 150 aa10.52□□□□□ -0.73
CLRN1-204ENST00000468836 GLT8D1Q68CQ7 371 aa10.52□□□□□ -0.73
CLRN1-204ENST00000468836 Q8NFD4 153 aa10.52□□□□□ -0.73
CLRN1-204ENST00000468836 MRGPRDQ8TDS7 321 aa10.52□□□□□ -0.73
CLRN1-204ENST00000468836 MRPS24Q96EL2 167 aaKnown RBP10.52□□□□□ -0.73
CLRN1-204ENST00000468836 C16orf95Q9H693 158 aa10.52□□□□□ -0.73
CLRN1-204ENST00000468836 RANBP3Q9H6Z4 567 aaPredicted RBP10.52□□□□□ -0.73
CLRN1-204ENST00000468836 DPM3Q9P2X0 92 aa10.52□□□□□ -0.73
CLRN1-204ENST00000468836 TCF19Q9Y242 345 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 45.5 ms