RNA–Protein interactions for RNA: ENST00000468545.1

TMEM39A-204, Transcript of transmembrane protein 39A, humanhuman

TSL 4

Gene TMEM39A, Length 575 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM39A-204ENST00000468545 DIABLOQ9NR28 239 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 PCDHB16Q9NRJ7 776 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 FAIMQ9NVQ4 179 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 RBFOX1Q9NWB1 397 aaKnown RBP3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 MTCH1Q9NZJ7 389 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 RNF7Q9UBF6 113 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 EXTL2Q9UBQ6 330 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 RAB22AQ9UL26 194 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 SPATA2Q9UM82 520 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 PPP1R3CQ9UQK1 317 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 NOP16Q9Y3C1 178 aaKnown RBP3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 CACNG2Q9Y698 323 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF462Q96JM2 2506 aa3.42□□□□□ -1.86
TMEM39A-204ENST00000468545 SMG1Q96Q15 3661 aaKnown RBP3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 HIVEP3Q5T1R4 2406 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 KMT2BQ9UMN6 2715 aaPredicted RBP3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 LINC00854A0A1B0GVQ3 168 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 CLEC18AA5D8T8 446 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 METTL21EPA6NDL7 271 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 LRRC30A6NM36 301 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 J3QRK9 145 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 J3QT63 122 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 SIRPB1O00241 398 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 HSPB6O14558 160 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 GEMIN2O14893 280 aaKnown RBP3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 DEGS1O15121 323 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 SOCS1O15524 211 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 NDUFS7O75251 213 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF780AO75290 641 aaPredicted RBP3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 NXPH2O95156 264 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 DANCRP0C864 163 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 UBBP0CG47 229 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 CD37P11049 281 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 PTHLHP12272 177 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 GTF2F2P13984 249 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF44P15621 663 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 MGMTP16455 207 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 GNB3P16520 340 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 CDK2P24941 298 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 BLVRBP30043 206 aaPredicted RBP3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 RANBP1P43487 201 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 CEBPDP49716 269 aaPredicted RBP3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 CAPZA1P52907 286 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 IL24Q13007 206 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 UNC119Q13432 240 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 GPR176Q14439 515 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 HFEQ30201 348 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 TMEM95Q3KNT9 176 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 PCGF3Q3KNV8 242 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 PIGYQ3MUY2 71 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 MOGAT2Q3SYC2 334 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 CDNFQ49AH0 187 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 SPANXN2Q5MJ10 180 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 AVPI1Q5T686 147 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 FAM166AQ6J272 317 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 CLEC18BQ6UXF7 455 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 WDR82Q6UXN9 313 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 Q6ZTK2 550 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 KRT74Q7RTS7 529 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 OR2W3Q7Z3T1 314 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 BIVMQ86UB2 503 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 RTN4RL2Q86UN3 420 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 LYPD6Q86Y78 171 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 SNX29P2Q8IUI4 249 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 OR8H2Q8N162 312 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 FAM58AQ8N1B3 248 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 BPIFB2Q8N4F0 458 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 ZSCAN4Q8NAM6 433 aaPredicted RBP3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 CLEC18CQ8NCF0 446 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 PXT1Q8NFP0 134 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 SETD6Q8TBK2 473 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 NEK7Q8TDX7 302 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 NEDD4LQ96PU5 975 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 CCL19Q99731 98 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 URM1Q9BTM9 101 aaKnown RBP3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 TRAF4Q9BUZ4 470 aaPredicted RBP3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 QTRT1Q9BXR0 403 aaKnown RBP3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 TMEM59Q9BXS4 323 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 PKIBQ9C010 78 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 PRSS22Q9GZN4 317 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 CST11Q9H112 138 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 LPAR5Q9H1C0 372 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 WDR13Q9H1Z4 485 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 RHBDL2Q9NX52 303 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 DCAF16Q9NXF7 216 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 ZNF581Q9P0T4 197 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 IL36RNQ9UBH0 155 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 GHRLQ9UBU3 117 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 IL19Q9UHD0 177 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 GLS2Q9UI32 602 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 ST3GAL6Q9Y274 331 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 POLDIP2Q9Y2S7 368 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 ETV7Q9Y603 341 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 CADP27708 2225 aa3.41□□□□□ -1.86
TMEM39A-204ENST00000468545 ICE1Q9Y2F5 2266 aa3.4□□□□□ -1.86
TMEM39A-204ENST00000468545 PPIAL4EA0A075B759 164 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 A0A0A6YYD4 124 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 IGHV1-69-2A0A0G2JMI3 117 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 A0A0G2JMP0 313 aa3.4□□□□□ -1.87
TMEM39A-204ENST00000468545 A0A0X1KG70 313 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 37.4 ms