RNA–Protein interactions for RNA: ENST00000467468.5

SMC4-208, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 4

Gene SMC4, Length 566 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-208ENST00000467468 OLFM3Q96PB7 478 aa2.45□□□□□ -2.02
SMC4-208ENST00000467468 PEBP4Q96S96 227 aa2.45□□□□□ -2.02
SMC4-208ENST00000467468 EBPLQ9BY08 206 aa2.45□□□□□ -2.02
SMC4-208ENST00000467468 FAM60AQ9NP50 221 aa2.45□□□□□ -2.02
SMC4-208ENST00000467468 TMEM38BQ9NVV0 291 aa2.45□□□□□ -2.02
SMC4-208ENST00000467468 PLEKHJ1Q9NW61 149 aa2.45□□□□□ -2.02
SMC4-208ENST00000467468 IL37Q9NZH6 218 aa2.45□□□□□ -2.02
SMC4-208ENST00000467468 NAGKQ9UJ70 344 aa2.45□□□□□ -2.02
SMC4-208ENST00000467468 C14orf166Q9Y224 244 aaKnown RBP2.45□□□□□ -2.02
SMC4-208ENST00000467468 V9GYY5 206 aaPredicted RBP2.45□□□□□ -2.02
SMC4-208ENST00000467468 TMEM250H0YL14 139 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 HPGDSO60760 199 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 WISP3O95389 354 aaPredicted RBP2.44□□□□□ -2.02
SMC4-208ENST00000467468 OR5AC1P0C628 307 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 CBX5P45973 191 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 RAB25P57735 213 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 FUT5Q11128 374 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 ZNF235Q14590 738 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 TMEM241Q24JQ0 296 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 CLEC12BQ2HXU8 276 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 TBC1D28Q2M2D7 210 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 TTMPQ5BVD1 217 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 CDKL4Q5MAI5 379 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 MRPL2Q5T653 305 aaKnown RBP2.44□□□□□ -2.02
SMC4-208ENST00000467468 NXNL2Q5VZ03 156 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 PTRHD1Q6GMV3 140 aaKnown RBP2.44□□□□□ -2.02
SMC4-208ENST00000467468 CLEC20AQ6ZU45 233 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 KRTAP5-5Q701N2 237 aaPredicted RBP2.44□□□□□ -2.02
SMC4-208ENST00000467468 MTERF4Q7Z6M4 381 aaKnown RBP2.44□□□□□ -2.02
SMC4-208ENST00000467468 OSR2Q8N2R0 312 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 TMEM251Q8N6I4 163 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 APCDD1LQ8NCL9 501 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 OR52E4Q8NGH9 312 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 STOML3Q8TAV4 291 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 RBP7Q96R05 134 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 FBXL15Q9H469 300 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 SPANXB1Q9NS25 103 aaPredicted RBP2.44□□□□□ -2.02
SMC4-208ENST00000467468 DMAC2Q9NW81 257 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 UBAP1Q9NZ09 502 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 TBL2Q9Y4P3 447 aaKnown RBP2.44□□□□□ -2.02
SMC4-208ENST00000467468 MTCH2Q9Y6C9 303 aa2.44□□□□□ -2.02
SMC4-208ENST00000467468 MYO15BQ96JP2 1530 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 IGLV3-12A0A075B6K2 115 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 IGKV2-28A0A075B6P5 120 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 IZUMO1RA6ND01 250 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 CCRL2O00421 344 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 RGS5O15539 181 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 KLHL2O95198 593 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 SOX14O95416 240 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 ATP6V1G2O95670 118 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 IGKV2D-28P01615 120 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 PSKH1P11801 424 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 HLA-DMAP28067 261 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 RCVRNP35243 200 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 COILP38432 576 aaPredicted RBP2.43□□□□□ -2.02
SMC4-208ENST00000467468 MAGEA2P43356 314 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 IDH2P48735 452 aaKnown RBP2.43□□□□□ -2.02
SMC4-208ENST00000467468 CDC34P49427 236 aaPredicted RBP2.43□□□□□ -2.02
SMC4-208ENST00000467468 CLDN12P56749 244 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 MGAT3Q09327 533 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 PAFAH1B3Q15102 231 aaKnown RBP2.43□□□□□ -2.02
SMC4-208ENST00000467468 LRRC26Q2I0M4 334 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 SLC36A2Q495M3 483 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 OLIG3Q7RTU3 272 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 MARCH3Q86UD3 253 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 TMEM156Q8N614 296 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 ZFP62Q8NB50 900 aaPredicted RBP2.43□□□□□ -2.02
SMC4-208ENST00000467468 OR2K2Q8NGT1 345 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 ITLN2Q8WWU7 325 aaPredicted RBP2.43□□□□□ -2.02
SMC4-208ENST00000467468 CLDN23Q96B33 292 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 CMTM5Q96DZ9 223 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 SMIM12Q96EX1 92 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 C1orf50Q9BV19 199 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 POTEKPQ9BYX7 375 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 HMGXB4Q9UGU5 601 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 POMPQ9Y244 141 aa2.43□□□□□ -2.02
SMC4-208ENST00000467468 POLR3AO14802 1390 aaPredicted RBP2.43□□□□□ -2.02
SMC4-208ENST00000467468 MYO3BQ8WXR4 1341 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 ATRNO75882 1429 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 SLIT3O75094 1523 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 TRAV40A0A0B4J280 105 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 TMEM150BA6NC51 233 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 COLCA2A8K830 154 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP2.42□□□□□ -2.02
SMC4-208ENST00000467468 CNTFRP26992 372 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 GRPRP30550 384 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 ACTR1BP42025 376 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 ZNF83P51522 516 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 C4orf26Q17RF5 130 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 TTC33Q6PID6 262 aaPredicted RBP2.42□□□□□ -2.02
SMC4-208ENST00000467468 DNM1P34Q6PK57 102 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 XKRXQ6PP77 449 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 DPPA2Q7Z7J5 298 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 C2orf73Q8N5S3 287 aaPredicted RBP2.42□□□□□ -2.02
SMC4-208ENST00000467468 KLF14Q8TD94 323 aaPredicted RBP2.42□□□□□ -2.02
SMC4-208ENST00000467468 YIPF5Q969M3 257 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 SPZ1Q9BXG8 430 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 ULBP1Q9BZM6 244 aa2.42□□□□□ -2.02
SMC4-208ENST00000467468 NSRP1Q9H0G5 558 aaKnown RBP2.42□□□□□ -2.02
SMC4-208ENST00000467468 USE1Q9NZ43 259 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms