RNA–Protein interactions for RNA: ENST00000467273.5

PTCD3-207, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 3

Gene PTCD3, Length 757 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-207ENST00000467273 ASB9Q96DX5 294 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 TMEM19Q96HH6 336 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 RCHY1Q96PM5 261 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 ECSITQ9BQ95 431 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 ATG101Q9BSB4 218 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 HCAR1Q9BXC0 346 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 PARD6BQ9BYG5 372 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 TOLLIPQ9H0E2 274 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 PPIL3Q9H2H8 161 aaKnown RBP4.33□□□□□ -1.72
PTCD3-207ENST00000467273 SIRT7Q9NRC8 400 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 PLCXD1Q9NUJ7 323 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 RHBDL2Q9NX52 303 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 ADA2Q9NZK5 511 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 SLC17A7Q9P2U7 560 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 DAPK2Q9UIK4 370 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 PRPF19Q9UMS4 504 aaKnown RBP4.33□□□□□ -1.72
PTCD3-207ENST00000467273 PIGLQ9Y2B2 252 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 EXOGQ9Y2C4 368 aaKnown RBP4.33□□□□□ -1.72
PTCD3-207ENST00000467273 STARD10Q9Y365 291 aa4.33□□□□□ -1.72
PTCD3-207ENST00000467273 RBMY1BA6NDE4 496 aaKnown RBP4.32□□□□□ -1.72
PTCD3-207ENST00000467273 RBMY1EA6NEQ0 496 aaKnown RBP4.32□□□□□ -1.72
PTCD3-207ENST00000467273 COPEO14579 308 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 RFXANKO14593 260 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 SGCEO43556 437 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 SYNGR1O43759 233 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 SLC2A10O95528 541 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 C1QCP02747 245 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 TSPAN19P0C672 248 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 RBMY1DP0C7P1 496 aaKnown RBP4.32□□□□□ -1.72
PTCD3-207ENST00000467273 DBTP11182 482 aaKnown RBP4.32□□□□□ -1.72
PTCD3-207ENST00000467273 ZNF182P17025 639 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-207ENST00000467273 BGNP21810 368 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 G0S2P27469 103 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 PTGFRP43088 359 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 VDAC2P45880 294 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-207ENST00000467273 HTR5AP47898 357 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 NPBWR1P48145 328 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 TGM4P49221 684 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 UGT2B15P54855 530 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 AP3S2P59780 193 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 CD47Q08722 323 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 ENDOGQ14249 297 aaKnown RBP4.32□□□□□ -1.72
PTCD3-207ENST00000467273 GK2Q14410 553 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-207ENST00000467273 OR8B8Q15620 311 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 LY6EQ16553 131 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 ACTBL2Q562R1 376 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 YIF1BQ5BJH7 314 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 LRIF1Q5T3J3 769 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 OR2T2Q6IF00 324 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 RNASEKQ6P5S7 137 aaKnown RBP4.32□□□□□ -1.72
PTCD3-207ENST00000467273 SLC25A47Q6Q0C1 308 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 FAM159AQ6UWV7 190 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 SLC16A12Q6ZSM3 486 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 SLC30A8Q8IWU4 369 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 OR5AS1Q8N127 324 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 PROKR2Q8NFJ6 384 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 OR4X2Q8NGF9 303 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 OR4A16Q8NH70 328 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 PIFOQ8TCI5 191 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 CHPT1Q8WUD6 406 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 GTF2H4Q92759 462 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 APOBEC3DQ96AK3 386 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-207ENST00000467273 C12orf43Q96C57 262 aaKnown RBP4.32□□□□□ -1.72
PTCD3-207ENST00000467273 RBP7Q96R05 134 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 OR52E6Q96RD3 313 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 NKX3-1Q99801 234 aaPredicted RBP4.32□□□□□ -1.72
PTCD3-207ENST00000467273 C7orf50Q9BRJ6 194 aaKnown RBP4.32□□□□□ -1.72
PTCD3-207ENST00000467273 ZNF426Q9BUY5 554 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 PAPOLGQ9BWT3 736 aaKnown RBP4.32□□□□□ -1.72
PTCD3-207ENST00000467273 TPT1P8Q9HAU6 139 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 INIPQ9NRY2 104 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 C19orf12Q9NSK7 152 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 NDE1Q9NXR1 346 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 ZNF580Q9UK33 172 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 ERGIC3Q9Y282 383 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 V9GYQ6 96 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 PCLOQ9Y6V0 5065 aa4.32□□□□□ -1.72
PTCD3-207ENST00000467273 TCRBV4S1A1TA0A5B7 111 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 METTL21EPA6NDL7 271 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 OR6C6A6NF89 314 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 SERPINE3A8MV23 424 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 C5orf58C9J3I9 102 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 BLOC1S5-TXNDC5H3BN57 136 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 NDUFB3O43676 98 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 GMDSO60547 372 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 FCN3O75636 299 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 SERPINE1P05121 402 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 OCMP0CE72 109 aaPredicted RBP4.31□□□□□ -1.72
PTCD3-207ENST00000467273 VPREB1P12018 145 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 HSD11B1P28845 292 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 VEGFCP49767 419 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 GSK3BP49841 420 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 ERFP50548 548 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 DYNLT3P51808 116 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 SPCS3P61009 180 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 VSNL1P62760 191 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 AQP6Q13520 282 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 NPTX1Q15818 432 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 MICBQ29980 383 aa4.31□□□□□ -1.72
PTCD3-207ENST00000467273 LRRC10Q5BKY1 277 aa4.31□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 37.7 ms