RNA–Protein interactions for RNA: ENST00000467263.1

SMC4-207, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 2

Gene SMC4, Length 401 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-207ENST00000467263 CMBLQ96DG6 245 aa1.2□□□□□ -2.22
SMC4-207ENST00000467263 UTP23Q9BRU9 249 aaKnown RBP1.2□□□□□ -2.22
SMC4-207ENST00000467263 SLC25A31Q9H0C2 315 aa1.2□□□□□ -2.22
SMC4-207ENST00000467263 PRORYQ9H606 182 aa1.2□□□□□ -2.22
SMC4-207ENST00000467263 KCNIP2Q9NS61 270 aa1.2□□□□□ -2.22
SMC4-207ENST00000467263 DNAJC27Q9NZQ0 273 aa1.2□□□□□ -2.22
SMC4-207ENST00000467263 LINC00588Q9Y4M8 146 aa1.2□□□□□ -2.22
SMC4-207ENST00000467263 PHLDA3Q9Y5J5 127 aa1.2□□□□□ -2.22
SMC4-207ENST00000467263 POLR3AO14802 1390 aaPredicted RBP1.2□□□□□ -2.22
SMC4-207ENST00000467263 C19orf71A6NCJ1 209 aa1.19□□□□□ -2.22
SMC4-207ENST00000467263 ZNF860A6NHJ4 632 aa1.19□□□□□ -2.22
SMC4-207ENST00000467263 KNCNA6PVL3 124 aa1.19□□□□□ -2.22
SMC4-207ENST00000467263 ZNF189O75820 626 aaPredicted RBP1.19□□□□□ -2.22
SMC4-207ENST00000467263 GYPCP04921 128 aa1.19□□□□□ -2.22
SMC4-207ENST00000467263 ELK4P28324 431 aa1.19□□□□□ -2.22
SMC4-207ENST00000467263 ARR3P36575 388 aa1.19□□□□□ -2.22
SMC4-207ENST00000467263 DOC2AQ14183 400 aa1.19□□□□□ -2.22
SMC4-207ENST00000467263 CEACAM21Q3KPI0 293 aa1.19□□□□□ -2.22
SMC4-207ENST00000467263 ZCWPW2Q504Y3 356 aa1.19□□□□□ -2.22
SMC4-207ENST00000467263 Q6ZSA8 131 aa1.19□□□□□ -2.22
SMC4-207ENST00000467263 LINC00523Q86TU6 105 aa1.19□□□□□ -2.22
SMC4-207ENST00000467263 RBM45Q8IUH3 476 aaKnown RBP1.19□□□□□ -2.22
SMC4-207ENST00000467263 OR51Q1Q8NH59 317 aa1.19□□□□□ -2.22
SMC4-207ENST00000467263 VAT1Q99536 393 aa1.19□□□□□ -2.22
SMC4-207ENST00000467263 TRPM3Q9HCF6 1732 aaPredicted RBP1.19□□□□□ -2.22
SMC4-207ENST00000467263 ACOT13Q9NPJ3 140 aa1.19□□□□□ -2.22
SMC4-207ENST00000467263 RPUSD1Q9UJJ7 312 aaKnown RBP1.19□□□□□ -2.22
SMC4-207ENST00000467263 V9GYY9 64 aa1.19□□□□□ -2.22
SMC4-207ENST00000467263 TRAV8-3A0A0A6YYJ7 113 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 PGPA6NDG6 321 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 ERICH4A6NGS2 130 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 ODF3BA8MYP8 253 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 ENSAO43768 121 aaKnown RBP1.18□□□□□ -2.22
SMC4-207ENST00000467263 GMDSO60547 372 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 ARL14EPLP0DKL9 152 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 CRABP1P29762 137 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 MAGEA6P43360 314 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 GOLGA7BQ2TAP0 167 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 C16orf87Q6PH81 154 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 NIT1Q86X76 327 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 C10orf107Q8IVU9 208 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 OR10P1Q8NGE3 313 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 OR4C16Q8NGL9 310 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 DDIT4LQ96D03 193 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 REEP6Q96HR9 211 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 ZNF625Q96I27 306 aaPredicted RBP1.18□□□□□ -2.22
SMC4-207ENST00000467263 NXF2Q9GZY0 626 aaKnown RBP1.18□□□□□ -2.22
SMC4-207ENST00000467263 FBXO44Q9H4M3 255 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 BTRCQ9Y297 605 aa1.18□□□□□ -2.22
SMC4-207ENST00000467263 AQRO60306 1485 aaKnown RBP eCLIP1.18□□□□□ -2.221e-12■■■■□ 21.5
SMC4-207ENST00000467263 ZNF638Q14966 1978 aaKnown RBP1.17□□□□□ -2.22
SMC4-207ENST00000467263 CEP170Q5SW79 1584 aa1.17□□□□□ -2.22
SMC4-207ENST00000467263 CR1P17927 2039 aa1.17□□□□□ -2.22
SMC4-207ENST00000467263 H3BRN7 92 aa1.17□□□□□ -2.22
SMC4-207ENST00000467263 CASC3O15234 703 aaKnown RBP1.17□□□□□ -2.22
SMC4-207ENST00000467263 RAB36O95755 333 aa1.17□□□□□ -2.22
SMC4-207ENST00000467263 MBP02144 154 aa1.17□□□□□ -2.22
SMC4-207ENST00000467263 APOFQ13790 326 aa1.17□□□□□ -2.22
SMC4-207ENST00000467263 DRAXINQ8NBI3 349 aaPredicted RBP1.17□□□□□ -2.22
SMC4-207ENST00000467263 GPR119Q8TDV5 335 aa1.17□□□□□ -2.22
SMC4-207ENST00000467263 DOK4Q8TEW6 326 aa1.17□□□□□ -2.22
SMC4-207ENST00000467263 FAM131CQ96AQ9 280 aa1.17□□□□□ -2.22
SMC4-207ENST00000467263 DNAJC30Q96LL9 226 aa1.17□□□□□ -2.22
SMC4-207ENST00000467263 SDHAF2Q9NX18 166 aa1.17□□□□□ -2.22
SMC4-207ENST00000467263 PSME2Q9UL46 239 aa1.17□□□□□ -2.22
SMC4-207ENST00000467263 COL4A2P08572 1712 aa1.17□□□□□ -2.22
SMC4-207ENST00000467263 ATRNO75882 1429 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 MED13Q9UHV7 2174 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 LOC102725191A0A1B0GVB3 256 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 FNDC10F2Z333 226 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 H0YIV9 168 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 SLC25A20O43772 301 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 SPOPO43791 374 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 CD8AP01732 235 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 PLTPP55058 493 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 SS18Q15532 418 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 MMDQ15546 238 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 C2orf73Q8N5S3 287 aaPredicted RBP1.16□□□□□ -2.22
SMC4-207ENST00000467263 OR4A15Q8NGL6 344 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 KCTD4Q8WVF5 259 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 TOP1MTQ969P6 601 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 ZNF251Q9BRH9 671 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 CXCL16Q9H2A7 254 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 DIABLOQ9NR28 239 aa1.16□□□□□ -2.22
SMC4-207ENST00000467263 RP1L1Q8IWN7 2480 aaPredicted RBP1.16□□□□□ -2.22
SMC4-207ENST00000467263 IGHV2-26A0A0B4J1V2 119 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 A0A1W2PPV4 95 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 A0A1W2PQL4 384 aaPredicted RBP1.15□□□□□ -2.23
SMC4-207ENST00000467263 A0A1W2PRG6 482 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 ARGFXA6NJG6 315 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 SOX14O95416 240 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 IGKV5-2P06315 115 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 CPMP14384 443 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 C2orf80Q0P641 193 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 STX4Q12846 297 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 GUSBP1Q15486 140 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 RESP18Q5W5W9 173 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 MUC15Q8N387 334 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 KRTCAP2Q8N6L1 136 aa1.15□□□□□ -2.23
SMC4-207ENST00000467263 GATD1Q8NB37 220 aa1.15□□□□□ -2.23
Retrieved 100 of 20,778 RNA–protein pairs in 34.3 ms