RNA–Protein interactions for RNA: ENST00000466591.1

COL7A1-206, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 778 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-206ENST00000466591 MED21Q13503 144 aa14.05□□□□□ -0.16
COL7A1-206ENST00000466591 HLA-DRB5Q30154 266 aa14.05□□□□□ -0.16
COL7A1-206ENST00000466591 TPTE2P1Q5T6R2 138 aa14.05□□□□□ -0.16
COL7A1-206ENST00000466591 SAMD5Q5TGI4 173 aa14.05□□□□□ -0.16
COL7A1-206ENST00000466591 BAIAP2L2Q6UXY1 529 aa14.05□□□□□ -0.16
COL7A1-206ENST00000466591 PARP16Q8N5Y8 322 aa14.05□□□□□ -0.16
COL7A1-206ENST00000466591 OR52I1Q8NGK6 324 aa14.05□□□□□ -0.16
COL7A1-206ENST00000466591 OR9G1Q8NH87 305 aa14.05□□□□□ -0.16
COL7A1-206ENST00000466591 PPIL3Q9H2H8 161 aaKnown RBP14.05□□□□□ -0.16
COL7A1-206ENST00000466591 CHCHD3Q9NX63 227 aaKnown RBP14.05□□□□□ -0.16
COL7A1-206ENST00000466591 VWFP04275 2813 aa14.05□□□□□ -0.16
COL7A1-206ENST00000466591 KBTBD11-OT1A0A1B0GTJ5 212 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 IRGMA1A4Y4 181 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 BUB1B-PAK6H3BSN5 160 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 PIN1P1O15428 100 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 OR2F2O95006 317 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 OXLD1Q5BKU9 147 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 Q6P435 159 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 Q6ZS46 218 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 OR10K1Q8NGX5 313 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 RHOXF1Q8NHV9 184 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 MRAPQ8TCY5 172 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 GPR148Q8TDV2 347 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 NEK7Q8TDX7 302 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 COQ2Q96H96 371 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 S100A14Q9HCY8 104 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 FAM118AQ9NWS6 357 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 TAS2R4Q9NYW5 299 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 KIF25Q9UIL4 384 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 ING4Q9UNL4 249 aa14.04□□□□□ -0.16
COL7A1-206ENST00000466591 DSCAML1Q8TD84 2053 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 NOTCH1P46531 2555 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 FAM90A22PA8MWA6 464 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 OOSP1A8MZH6 123 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 E9PI62 339 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 ALX3O95076 343 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 CD34P28906 385 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 GNG10P50151 68 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 ZP1P60852 638 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 RNF144BQ7Z419 303 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 PQLC1Q8N2U9 271 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 PXT1Q8NFP0 134 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 OR10X1Q8NGY0 326 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 CNIH3Q8TBE1 160 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 RBM14Q96PK6 669 aaKnown RBP14.03□□□□□ -0.16
COL7A1-206ENST00000466591 JAM3Q9BX67 310 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 WNT10AQ9GZT5 417 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 NECAP2Q9NVZ3 263 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 PAK1IP1Q9NWT1 392 aaPredicted RBP14.03□□□□□ -0.16
COL7A1-206ENST00000466591 CALYQ9NYX4 217 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 IDI2-AS1Q9NZ38 188 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 CKLFQ9UBR5 152 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 CMYA5Q8N3K9 4069 aa14.03□□□□□ -0.16
COL7A1-206ENST00000466591 EBAG9O00559 213 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 GABRPO00591 440 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 OR7C1O76099 320 aaPredicted RBP14.02□□□□□ -0.17
COL7A1-206ENST00000466591 IGLV1-47P01700 117 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 IGHV3-7P01780 117 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 GDNFP39905 211 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 KCNJ3P48549 501 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 GTF2A1P52655 376 aaPredicted RBP14.02□□□□□ -0.17
COL7A1-206ENST00000466591 MADCAM1Q13477 382 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 IL13RA2Q14627 380 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 CDK5R1Q15078 307 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 DDI2Q5TDH0 399 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 RPL22L1Q6P5R6 122 aaKnown RBP14.02□□□□□ -0.17
COL7A1-206ENST00000466591 OR51T1Q8NGJ9 327 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 MRGPRDQ8TDS7 321 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 TMEM106AQ96A25 262 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 METTL9Q9H1A3 318 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 MOB4Q9Y3A3 225 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 TSSC4Q9Y5U2 329 aaPredicted RBP14.02□□□□□ -0.17
COL7A1-206ENST00000466591 HSPE1-MOB4S4R3N1 261 aa14.02□□□□□ -0.17
COL7A1-206ENST00000466591 GABRB1P18505 474 aa14.01□□□□□ -0.17
COL7A1-206ENST00000466591 SERPINA2P20848 420 aa14.01□□□□□ -0.17
COL7A1-206ENST00000466591 ZNF93P35789 620 aaPredicted RBP14.01□□□□□ -0.17
COL7A1-206ENST00000466591 PIGYQ3MUY2 71 aa14.01□□□□□ -0.17
COL7A1-206ENST00000466591 CCDC58Q4VC31 144 aa14.01□□□□□ -0.17
COL7A1-206ENST00000466591 ATAD3CQ5T2N8 411 aa14.01□□□□□ -0.17
COL7A1-206ENST00000466591 ELP2Q6IA86 826 aa14.01□□□□□ -0.17
COL7A1-206ENST00000466591 OR51A2Q8NGJ7 313 aa14.01□□□□□ -0.17
COL7A1-206ENST00000466591 OR56B4Q8NH76 319 aa14.01□□□□□ -0.17
COL7A1-206ENST00000466591 LEAP2Q969E1 77 aa14.01□□□□□ -0.17
COL7A1-206ENST00000466591 KIRREL1Q96J84 757 aa14.01□□□□□ -0.17
COL7A1-206ENST00000466591 SLC29A1Q99808 456 aa14.01□□□□□ -0.17
COL7A1-206ENST00000466591 OCSTAMPQ9BR26 566 aa14.01□□□□□ -0.17
COL7A1-206ENST00000466591 SMPD3Q9NY59 655 aaPredicted RBP14.01□□□□□ -0.17
COL7A1-206ENST00000466591 ST3GAL6Q9Y274 331 aa14.01□□□□□ -0.17
COL7A1-206ENST00000466591 SH2D7A6NKC9 451 aaPredicted RBP14□□□□□ -0.17
COL7A1-206ENST00000466591 J3QR06 171 aa14□□□□□ -0.17
COL7A1-206ENST00000466591 CDRT1O95170 752 aa14□□□□□ -0.17
COL7A1-206ENST00000466591 IL1AP01583 271 aa14□□□□□ -0.17
COL7A1-206ENST00000466591 TMEM11P17152 192 aa14□□□□□ -0.17
COL7A1-206ENST00000466591 DCKP27707 260 aa14□□□□□ -0.17
COL7A1-206ENST00000466591 C17orf58Q2M2W7 97 aa14□□□□□ -0.17
COL7A1-206ENST00000466591 KPRPQ5T749 579 aaPredicted RBP14□□□□□ -0.17
COL7A1-206ENST00000466591 STX19Q8N4C7 294 aa14□□□□□ -0.17
COL7A1-206ENST00000466591 OR13A1Q8NGR1 328 aa14□□□□□ -0.17
COL7A1-206ENST00000466591 RFESDQ8TAC1 157 aa14□□□□□ -0.17
COL7A1-206ENST00000466591 CYGBQ8WWM9 190 aa14□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 34.2 ms