RNA–Protein interactions for RNA: ENST00000466222.6

CAPN3-209, Transcript of calpain 3, humanhuman

TSL 2

Gene CAPN3, Length 1,934 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-209ENST00000466222 AMY2BP19961 511 aa15.83■□□□□ 0.12
CAPN3-209ENST00000466222 PTAFRP25105 342 aa15.83■□□□□ 0.12
CAPN3-209ENST00000466222 ECI1P42126 302 aa15.83■□□□□ 0.12
CAPN3-209ENST00000466222 TMEM171Q8WVE6 324 aa15.83■□□□□ 0.12
CAPN3-209ENST00000466222 GTF3AQ92664 365 aaKnown RBP15.83■□□□□ 0.12
CAPN3-209ENST00000466222 PLPPR2Q96GM1 343 aa15.83■□□□□ 0.12
CAPN3-209ENST00000466222 TM2D1Q9BX74 207 aa15.83■□□□□ 0.12
CAPN3-209ENST00000466222 NDRG3Q9UGV2 375 aa15.83■□□□□ 0.12
CAPN3-209ENST00000466222 DIDO1Q9BTC0 2240 aaKnown RBP15.83■□□□□ 0.12
CAPN3-209ENST00000466222 FOXI3A8MTJ6 420 aaPredicted RBP15.82■□□□□ 0.12
CAPN3-209ENST00000466222 SERPINE3A8MV23 424 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 TSPAN4O14817 238 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 CST4P01036 141 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 RBMXP38159 391 aaKnown RBP15.82■□□□□ 0.12
CAPN3-209ENST00000466222 GPM6AP51674 278 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 ATXN7L3Q14CW9 347 aaPredicted RBP15.82■□□□□ 0.12
CAPN3-209ENST00000466222 CSNK2A3Q8NEV1 391 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 NEUROG1Q92886 237 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 PIK3IP1Q96FE7 263 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 ARHGAP5-AS1Q96IT6 56 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 SYT3Q9BQG1 590 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 BANF2Q9H503 90 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 C5orf66Q9H5L9 145 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 MSL2Q9HCI7 577 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 PURGQ9UJV8 347 aaKnown RBP15.82■□□□□ 0.12
CAPN3-209ENST00000466222 A0A1W2PP11 408 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 ANKRD30BLA7E2S9 258 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 C19orf84I3L1E1 186 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 SPRY1O43609 319 aaPredicted RBP15.82■□□□□ 0.12
CAPN3-209ENST00000466222 ANGPTL7O43827 346 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 PTGFRP43088 359 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 ZNF718Q3SXZ3 478 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 FAM74A1Q5RGS3 127 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 CALHM1Q8IU99 346 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 ZDHHC23Q8IYP9 409 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 BATF2Q8N1L9 274 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 OR51T1Q8NGJ9 327 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 TMEM230Q96A57 120 aa15.82■□□□□ 0.12
CAPN3-209ENST00000466222 MYO18BQ8IUG5 2567 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 CADP27708 2225 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 C13orf42A0A1B0GVH6 325 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.81■□□□□ 0.12
CAPN3-209ENST00000466222 IQCF6A8MYZ5 107 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 C3orf80F5H4A9 247 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 FGF16O43320 207 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 SELEP16581 610 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 ATF4P18848 351 aaPredicted RBP15.81■□□□□ 0.12
CAPN3-209ENST00000466222 GCH1P30793 250 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 GLRXP35754 106 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 MBNL2Q5VZF2 373 aaKnown RBP15.81■□□□□ 0.12
CAPN3-209ENST00000466222 UNQ6126/PRO20091Q6UXV3 157 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 Q6ZR03 302 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 OR10AD1Q8NGE0 317 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 OR5AP2Q8NGF4 316 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 DCUN1D4Q92564 292 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 MARC2Q969Z3 335 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 SPSB1Q96BD6 273 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 BORCS8Q96FH0 119 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 HS3ST6Q96QI5 342 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 C12orf4Q9NQ89 552 aa15.81■□□□□ 0.12
CAPN3-209ENST00000466222 TIMM8AO60220 97 aaPredicted RBP15.8■□□□□ 0.12
CAPN3-209ENST00000466222 PLAUP00749 431 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 PET100P0DJ07 73 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 CPT2P23786 658 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 RBP2P50120 134 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 CNN3Q15417 329 aaKnown RBP15.8■□□□□ 0.12
CAPN3-209ENST00000466222 CEACAM21Q3KPI0 293 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 NCMAPQ5T1S8 102 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 PRSS54Q6PEW0 395 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 CLEC18BQ6UXF7 455 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 DMRTC2Q8IXT2 367 aaPredicted RBP15.8■□□□□ 0.12
CAPN3-209ENST00000466222 OR5P3Q8WZ94 311 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 EMG1Q92979 244 aaKnown RBP15.8■□□□□ 0.12
CAPN3-209ENST00000466222 CYYR1Q96J86 154 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 S100A13Q99584 98 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 SLC7A11Q9UPY5 501 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 LRBAP50851 2863 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 UBR5O95071 2799 aaPredicted RBP15.8■□□□□ 0.12
CAPN3-209ENST00000466222 MPTX1A8MV57 137 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 FUT6P51993 359 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 BEX5Q5H9J7 111 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 ZNF808Q8N4W9 903 aaPredicted RBP15.8■□□□□ 0.12
CAPN3-209ENST00000466222 CPNE2Q96FN4 548 aaPredicted RBP15.8■□□□□ 0.12
CAPN3-209ENST00000466222 PECRQ9BY49 303 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 MRPL37Q9BZE1 423 aaKnown RBP15.8■□□□□ 0.12
CAPN3-209ENST00000466222 ZC4H2Q9NQZ6 224 aa15.8■□□□□ 0.12
CAPN3-209ENST00000466222 UTP20O75691 2785 aaKnown RBP15.79■□□□□ 0.12
CAPN3-209ENST00000466222 USP9XQ93008 2570 aaPredicted RBP15.79■□□□□ 0.12
CAPN3-209ENST00000466222 PQLC2LA1A4F0 135 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 SHISA9B4DS77 424 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 ZNF732B4DXR9 585 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 TRIM77I1YAP6 450 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 MLNRO43193 412 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 APOC3P02656 99 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 PGAM2P15259 253 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 KITLGP21583 273 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 NPY4RP50391 375 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 ELP2Q6IA86 826 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 FAM122CQ6P4D5 195 aa15.79■□□□□ 0.12
CAPN3-209ENST00000466222 WDR86Q86TI4 376 aa15.79■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 87.6 ms