RNA–Protein interactions for RNA: ENST00000465441.1

CSPG5-204, Transcript of chondroitin sulfate proteoglycan 5, humanhuman

TSL 4

Gene CSPG5, Length 593 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG5-204ENST00000465441 OR5AK2Q8NH90 309 aa16.62■□□□□ 0.25
CSPG5-204ENST00000465441 RHOXF1Q8NHV9 184 aa16.62■□□□□ 0.25
CSPG5-204ENST00000465441 ERVK13-1Q9NX77 482 aa16.62■□□□□ 0.25
CSPG5-204ENST00000465441 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.62■□□□□ 0.25
CSPG5-204ENST00000465441 TSSC4Q9Y5U2 329 aaPredicted RBP16.62■□□□□ 0.25
CSPG5-204ENST00000465441 TMEM212A6NML5 194 aa16.61■□□□□ 0.25
CSPG5-204ENST00000465441 H0YJX3 145 aa16.61■□□□□ 0.25
CSPG5-204ENST00000465441 RPSAP08865 295 aaKnown RBP16.61■□□□□ 0.25
CSPG5-204ENST00000465441 PF4V1P10720 104 aa16.61■□□□□ 0.25
CSPG5-204ENST00000465441 MNDAP41218 407 aa16.61■□□□□ 0.25
CSPG5-204ENST00000465441 ELP2Q6IA86 826 aa16.61■□□□□ 0.25
CSPG5-204ENST00000465441 ZNF565Q8N9K5 539 aa16.61■□□□□ 0.25
CSPG5-204ENST00000465441 PXT1Q8NFP0 134 aa16.61■□□□□ 0.25
CSPG5-204ENST00000465441 OR9G1Q8NH87 305 aa16.61■□□□□ 0.25
CSPG5-204ENST00000465441 MYDGFQ969H8 173 aa16.61■□□□□ 0.25
CSPG5-204ENST00000465441 KIRREL1Q96J84 757 aa16.61■□□□□ 0.25
CSPG5-204ENST00000465441 Q96MT0 163 aa16.61■□□□□ 0.25
CSPG5-204ENST00000465441 DHDHQ9UQ10 334 aa16.61■□□□□ 0.25
CSPG5-204ENST00000465441 TRAV24A0A0B4J272 114 aa16.6■□□□□ 0.25
CSPG5-204ENST00000465441 OOSP1A8MZH6 123 aa16.6■□□□□ 0.25
CSPG5-204ENST00000465441 HSPB6O14558 160 aa16.6■□□□□ 0.25
CSPG5-204ENST00000465441 FADS2O95864 444 aaKnown RBP16.6■□□□□ 0.25
CSPG5-204ENST00000465441 C9orf152Q5JTZ5 239 aa16.6■□□□□ 0.25
CSPG5-204ENST00000465441 CCDC144NLQ6NUI1 221 aa16.6■□□□□ 0.25
CSPG5-204ENST00000465441 ZFP1Q6P2D0 407 aa16.6■□□□□ 0.25
CSPG5-204ENST00000465441 SATL1Q86VE3 508 aa16.6■□□□□ 0.25
CSPG5-204ENST00000465441 OR13A1Q8NGR1 328 aa16.6■□□□□ 0.25
CSPG5-204ENST00000465441 CNIH3Q8TBE1 160 aa16.6■□□□□ 0.25
CSPG5-204ENST00000465441 SLC29A1Q99808 456 aa16.6■□□□□ 0.25
CSPG5-204ENST00000465441 BARHL1Q9BZE3 327 aa16.6■□□□□ 0.25
CSPG5-204ENST00000465441 NCOR1P1Q9H4R4 102 aa16.6■□□□□ 0.25
CSPG5-204ENST00000465441 KIF25Q9UIL4 384 aa16.6■□□□□ 0.25
CSPG5-204ENST00000465441 MEIKINA0A087WXM9 373 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 FAM90A18PA6NE21 464 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 FAM90A16PA6NEW6 464 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 FAM90A20PA6NIJ5 464 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 FAM90A9PA6NNJ1 464 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 FAM90A12PA8MX19 464 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 FAM90A5PA8MXJ8 464 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 J3QR06 171 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 MPZL2O60487 215 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 IGHV3-7P01780 117 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 CCDC159P0C7I6 412 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 FAM90A15PP0C7V4 464 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 FAM90A13PP0C7W8 464 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 FAM90A14PP0C7W9 464 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 FAM90A24PP0C7X0 464 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 C21orf33P30042 268 aaPredicted RBP16.59■□□□□ 0.25
CSPG5-204ENST00000465441 GBX2P52951 348 aaPredicted RBP16.59■□□□□ 0.25
CSPG5-204ENST00000465441 MRPL28Q13084 256 aaKnown RBP16.59■□□□□ 0.25
CSPG5-204ENST00000465441 ZSCAN26Q16670 478 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 PAN3Q58A45 887 aaKnown RBP16.59■□□□□ 0.25
CSPG5-204ENST00000465441 LPCAT4Q643R3 524 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 THNSL2Q86YJ6 484 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 OR51A2Q8NGJ7 313 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 OR52I1Q8NGK6 324 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 TSEN15Q8WW01 171 aaKnown RBP16.59■□□□□ 0.25
CSPG5-204ENST00000465441 INPP5EQ9NRR6 644 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 MRPS18AQ9NVS2 196 aaKnown RBP16.59■□□□□ 0.25
CSPG5-204ENST00000465441 CALYQ9NYX4 217 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 IDI2-AS1Q9NZ38 188 aa16.59■□□□□ 0.25
CSPG5-204ENST00000465441 LOC100130705A0A1B0GUX0 176 aa16.58■□□□□ 0.24
CSPG5-204ENST00000465441 GABRPO00591 440 aa16.58■□□□□ 0.24
CSPG5-204ENST00000465441 FAM106CPP0CH98 169 aa16.58■□□□□ 0.24
CSPG5-204ENST00000465441 RAB3AP20336 220 aa16.58■□□□□ 0.24
CSPG5-204ENST00000465441 GLP1RP43220 463 aa16.58■□□□□ 0.24
CSPG5-204ENST00000465441 GTF2A1P52655 376 aaPredicted RBP16.58■□□□□ 0.24
CSPG5-204ENST00000465441 RAB40BQ12829 278 aa16.58■□□□□ 0.24
CSPG5-204ENST00000465441 ZNF529Q6P280 563 aa16.58■□□□□ 0.24
CSPG5-204ENST00000465441 OR4X2Q8NGF9 303 aa16.58■□□□□ 0.24
CSPG5-204ENST00000465441 OR10K1Q8NGX5 313 aa16.58■□□□□ 0.24
CSPG5-204ENST00000465441 RFESDQ8TAC1 157 aa16.58■□□□□ 0.24
CSPG5-204ENST00000465441 TNFAIP8L1Q8WVP5 186 aa16.58■□□□□ 0.24
CSPG5-204ENST00000465441 LEAP2Q969E1 77 aa16.58■□□□□ 0.24
CSPG5-204ENST00000465441 RPEQ96AT9 228 aa16.58■□□□□ 0.24
CSPG5-204ENST00000465441 GPER1Q99527 375 aa16.58■□□□□ 0.24
CSPG5-204ENST00000465441 NPIPB11E5RHQ5 1161 aa16.57■□□□□ 0.24
CSPG5-204ENST00000465441 M0QZK8 103 aa16.57■□□□□ 0.24
CSPG5-204ENST00000465441 MAGEB3O15480 346 aa16.57■□□□□ 0.24
CSPG5-204ENST00000465441 PF4P02776 101 aa16.57■□□□□ 0.24
CSPG5-204ENST00000465441 SOX2P48431 317 aa16.57■□□□□ 0.24
CSPG5-204ENST00000465441 DIAPH2-AS1Q14236 149 aa16.57■□□□□ 0.24
CSPG5-204ENST00000465441 IL13RA2Q14627 380 aa16.57■□□□□ 0.24
CSPG5-204ENST00000465441 LTC4SQ16873 150 aa16.57■□□□□ 0.24
CSPG5-204ENST00000465441 ASCL4Q6XD76 172 aa16.57■□□□□ 0.24
CSPG5-204ENST00000465441 Q8NFD4 153 aa16.57■□□□□ 0.24
CSPG5-204ENST00000465441 PLPPR1Q8TBJ4 325 aa16.57■□□□□ 0.24
CSPG5-204ENST00000465441 C9orf16Q9BUW7 83 aa16.57■□□□□ 0.24
CSPG5-204ENST00000465441 LINC00574Q9H8X3 128 aa16.57■□□□□ 0.24
CSPG5-204ENST00000465441 PSG11Q9UQ72 335 aa16.57■□□□□ 0.24
CSPG5-204ENST00000465441 RPL36Q9Y3U8 105 aaKnown RBP16.57■□□□□ 0.24
CSPG5-204ENST00000465441 HTR3BO95264 441 aa16.56■□□□□ 0.24
CSPG5-204ENST00000465441 MPIG6BO95866 241 aa16.56■□□□□ 0.24
CSPG5-204ENST00000465441 SNRNP70P08621 437 aaKnown RBP16.56■□□□□ 0.24
CSPG5-204ENST00000465441 PIGYQ3MUY2 71 aa16.56■□□□□ 0.24
CSPG5-204ENST00000465441 KLHL22Q53GT1 634 aa16.56■□□□□ 0.24
CSPG5-204ENST00000465441 RSBN1Q5VWQ0 802 aaPredicted RBP16.56■□□□□ 0.24
CSPG5-204ENST00000465441 OSR2Q8N2R0 312 aa16.56■□□□□ 0.24
CSPG5-204ENST00000465441 MRGPRDQ8TDS7 321 aa16.56■□□□□ 0.24
CSPG5-204ENST00000465441 RGP1Q92546 391 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms