RNA–Protein interactions for RNA: ENST00000465269.5

HDAC6-214, Transcript of histone deacetylase 6, humanhuman

TSL 1 (best)

Gene HDAC6, Length 1,139 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-214ENST00000465269 UBE2J1Q9Y385 318 aaPredicted RBP11.57□□□□□ -0.56
HDAC6-214ENST00000465269 GMPPBQ9Y5P6 360 aa11.57□□□□□ -0.56
HDAC6-214ENST00000465269 PKHD1P08F94 4074 aa11.57□□□□□ -0.56
HDAC6-214ENST00000465269 IGHV3-72A0A0B4J1Y9 119 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 LOC100130705A0A1B0GUX0 176 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 NCBP2LA6PVI3 153 aaKnown RBP11.56□□□□□ -0.56
HDAC6-214ENST00000465269 ELANEP08246 267 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 NFYBP25208 207 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 CD34P28906 385 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 OR3A1P47881 315 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 P2RX3P56373 397 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 ZNF616Q08AN1 781 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 KIAA0141Q14154 515 aaPredicted RBP11.56□□□□□ -0.56
HDAC6-214ENST00000465269 BCDIN3DQ7Z5W3 292 aaKnown RBP11.56□□□□□ -0.56
HDAC6-214ENST00000465269 DHRSXQ8N5I4 330 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 GATAD1Q8WUU5 269 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 ARPC1AQ92747 370 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 HSPB9Q9BQS6 159 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 VCXQ9H320 206 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 FAM206AQ9NX38 181 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 ENPP5Q9UJA9 477 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 SLC7A11Q9UPY5 501 aa11.56□□□□□ -0.56
HDAC6-214ENST00000465269 FAM230AA0A1W2PPH8 454 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 MAGEA13PA6NCF6 341 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 I3L521 148 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 IFNA6P05013 189 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 GLIPR1P48060 266 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 AQP4P55087 323 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 CDC42P60953 191 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 EFNB1P98172 346 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 OR52W1Q6IF63 320 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 SHFQ7M4L6 423 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 BBS1Q8NFJ9 593 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 OTOSQ8NHW6 89 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 CEP19Q96LK0 163 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 RDH12Q96NR8 316 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 TTTY10Q9BZA0 68 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 PRRG3Q9BZD7 231 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 IMPAD1Q9NX62 359 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 H2AFY2Q9P0M6 372 aaPredicted RBP11.55□□□□□ -0.56
HDAC6-214ENST00000465269 AASSQ9UDR5 926 aa11.55□□□□□ -0.56
HDAC6-214ENST00000465269 IGKV1-27A0A075B6S5 117 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 A0A0U1RQV5 110 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 PRR32B1ATL7 298 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 SIRPB1O00241 398 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 SLC16A6O15403 523 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 IGHG4P01861 327 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 CNTFRP26992 372 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 PSMB8P28062 276 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 PRRX1P54821 245 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 ADARB1P78563 741 aaKnown RBP11.54□□□□□ -0.56
HDAC6-214ENST00000465269 AESQ08117 197 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 MFGE8Q08431 387 aaPredicted RBP11.54□□□□□ -0.56
HDAC6-214ENST00000465269 IL24Q13007 206 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 TMEM163Q8TC26 289 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 EMG1Q92979 244 aaKnown RBP11.54□□□□□ -0.56
HDAC6-214ENST00000465269 PBOV1Q9GZY1 135 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 ABCG5Q9H222 651 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 VCX3BQ9H321 246 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 GAL3ST2Q9H3Q3 398 aa11.54□□□□□ -0.56
HDAC6-214ENST00000465269 TRGV10A0A0A0MS01 117 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 TMEM269A0A1B0GVZ9 245 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 OOSP1A8MZH6 123 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 MGST3O14880 152 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 IGLV3-1P01715 115 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 ARSBP15848 533 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 FSTP19883 344 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 VHLP40337 213 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 NPBWR2P48146 333 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 REG1BP48304 166 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 RPS7P62081 194 aaKnown RBP11.53□□□□□ -0.56
HDAC6-214ENST00000465269 ZNF91Q05481 1191 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 APOFQ13790 326 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 CLVS2Q5SYC1 327 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 TTC23Q5W5X9 447 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 TMEM42Q69YG0 159 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 SATL1Q86VE3 508 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 Q8N9W7 124 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 OR8J1Q8NGP2 316 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 OR6Q1Q8NGQ2 317 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 MYOZ3Q8TDC0 251 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 CREB3L1Q96BA8 519 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 KCTD7Q96MP8 289 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 ADI1Q9BV57 179 aa11.53□□□□□ -0.56
HDAC6-214ENST00000465269 RBFOX1Q9NWB1 397 aaKnown RBP11.53□□□□□ -0.56
HDAC6-214ENST00000465269 A0A1W2PPE3 182 aa11.52□□□□□ -0.57
HDAC6-214ENST00000465269 DEDDO75618 318 aa11.52□□□□□ -0.57
HDAC6-214ENST00000465269 CAPGP40121 348 aa11.52□□□□□ -0.57
HDAC6-214ENST00000465269 MTNR1BP49286 362 aa11.52□□□□□ -0.57
HDAC6-214ENST00000465269 BLVRAP53004 296 aa11.52□□□□□ -0.57
HDAC6-214ENST00000465269 LTC4SQ16873 150 aa11.52□□□□□ -0.57
HDAC6-214ENST00000465269 IZUMO2Q6UXV1 221 aa11.52□□□□□ -0.57
HDAC6-214ENST00000465269 SLC25A26Q70HW3 274 aa11.52□□□□□ -0.57
HDAC6-214ENST00000465269 SGPP2Q8IWX5 399 aa11.52□□□□□ -0.57
HDAC6-214ENST00000465269 ENTHD1Q8IYW4 607 aa11.52□□□□□ -0.57
HDAC6-214ENST00000465269 ZNF491Q8N8L2 437 aa11.52□□□□□ -0.57
HDAC6-214ENST00000465269 TRUB1Q8WWH5 349 aaKnown RBP11.52□□□□□ -0.57
HDAC6-214ENST00000465269 EAF1Q96JC9 268 aaPredicted RBP11.52□□□□□ -0.57
HDAC6-214ENST00000465269 NABP2Q9BQ15 211 aa11.52□□□□□ -0.57
HDAC6-214ENST00000465269 PKIBQ9C010 78 aa11.52□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms