RNA–Protein interactions for RNA: ENST00000464541.5

PTCD3-205, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 5

Gene PTCD3, Length 890 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-205ENST00000464541 LSM5Q9Y4Y9 91 aaKnown RBP3.08□□□□□ -1.92
PTCD3-205ENST00000464541 NUP214P35658 2090 aaPredicted RBP3.08□□□□□ -1.92
PTCD3-205ENST00000464541 IGHV3OR16-9A0A0B4J2B5 98 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 GOLGA6L4A6NEF3 574 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 LINC01619G3V211 115 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 I3L4J1 428 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 TAAR5O14804 337 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 RAD1O60671 282 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 YIF1AO95070 293 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 IFNA14P01570 189 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 OR56A5P0C7T3 313 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 AKR1C4P17516 323 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 CFL1P23528 166 aaKnown RBP3.07□□□□□ -1.92
PTCD3-205ENST00000464541 GRPRP30550 384 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 MYCNOSP40205 109 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 PSMD7P51665 324 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 FAM3AP98173 230 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 BAXQ07812 192 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 ZNF816Q0VGE8 651 aaPredicted RBP3.07□□□□□ -1.92
PTCD3-205ENST00000464541 MAPK14Q16539 360 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 HIST3H3Q16695 136 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 LAMTOR1Q6IAA8 161 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 NIT1Q86X76 327 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 ZFP41Q8N8Y5 198 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 PXT1Q8NFP0 134 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 OR1M1Q8NGA1 313 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 OR2D3Q8NGH3 330 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 OR52P1PQ8NH57 321 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 COQ8AQ8NI60 647 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 DCPSQ96C86 337 aaKnown RBP3.07□□□□□ -1.92
PTCD3-205ENST00000464541 L3HYPDHQ96EM0 354 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 GALNT14Q96FL9 552 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 PGLYRP3Q96LB9 341 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 CAMK2N2Q96S95 79 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 FAAP24Q9BTP7 215 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 TMED9Q9BVK6 235 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 TAPBPLQ9BX59 468 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 SLC19A3Q9BZV2 496 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 TSGA10Q9BZW7 698 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 BATF3Q9NR55 127 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 GID8Q9NWU2 228 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 NDRG2Q9UN36 371 aaKnown RBP3.07□□□□□ -1.92
PTCD3-205ENST00000464541 TP53TG1Q9Y2A0 90 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 ZNF257Q9Y2Q1 563 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 ORC6Q9Y5N6 252 aa3.07□□□□□ -1.92
PTCD3-205ENST00000464541 NUP153P49790 1475 aaKnown RBP3.07□□□□□ -1.92
PTCD3-205ENST00000464541 A0A0U1RQV1 116 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 GNG14A0A1W2PPG7 69 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 FHAD1B1AJZ9 1412 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 J3QT63 122 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 PSMD12O00232 456 aaPredicted RBP3.06□□□□□ -1.92
PTCD3-205ENST00000464541 KPNA3O00505 521 aaPredicted RBP3.06□□□□□ -1.92
PTCD3-205ENST00000464541 BPY2O14599 106 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 MT-ND4P03905 459 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 RAB3AP20336 220 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 RPL12P30050 165 aaKnown RBP3.06□□□□□ -1.92
PTCD3-205ENST00000464541 PYCR1P32322 319 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 P2RX1P51575 399 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 TCL1AP56279 114 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 RAB4BP61018 213 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 RPS23P62266 143 aaKnown RBP3.06□□□□□ -1.92
PTCD3-205ENST00000464541 CACNG7P62955 275 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 FAM53BQ14153 422 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 POU6F1Q14863 301 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 RGNQ15493 299 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 SLC9A3R2Q15599 337 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 TTC32Q5I0X7 151 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 SPNS3Q6ZMD2 512 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 LGI3Q8N145 548 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 GAPTQ8N292 157 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 NPWQ8N729 165 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 OR11H7Q8NGC8 314 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 NEK7Q8TDX7 302 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 CYGBQ8WWM9 190 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 RXFP2Q8WXD0 754 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 SLIRPQ9GZT3 109 aaKnown RBP3.06□□□□□ -1.92
PTCD3-205ENST00000464541 C19orf12Q9NSK7 152 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 DDIT4Q9NX09 232 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 VPS29Q9UBQ0 182 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 HES2Q9Y543 173 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 UBIAD1Q9Y5Z9 338 aa3.06□□□□□ -1.92
PTCD3-205ENST00000464541 EIF3AQ14152 1382 aaKnown RBP3.05□□□□□ -1.92
PTCD3-205ENST00000464541 H7C417 338 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 FADS1O60427 444 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 GCM2O75603 506 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-205ENST00000464541 OR2B3O76000 313 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 SSTR5P35346 364 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 GGT2P36268 569 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 TGFBR2P37173 567 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 GCLMP48507 274 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 RPL19P84098 196 aaKnown RBP3.05□□□□□ -1.92
PTCD3-205ENST00000464541 TAF1AQ15573 450 aaPredicted RBP3.05□□□□□ -1.92
PTCD3-205ENST00000464541 METTL21CQ5VZV1 264 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 TRIQKQ629K1 86 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 SAXO2Q658L1 398 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 STEAP4Q687X5 459 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 RASSF6Q6ZTQ3 369 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 FAM183BPQ6ZVS7 135 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 FAM231DQ6ZW35 169 aa3.05□□□□□ -1.92
PTCD3-205ENST00000464541 CCNYL1Q8N7R7 359 aa3.05□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms