RNA–Protein interactions for RNA: ENST00000464425.1

VPS52-215, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 5

Gene VPS52, Length 1,060 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-215ENST00000464425 LMO1P25800 156 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 ERVFRD-1P60508 538 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 QRFPP83859 136 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 ZNF273Q14593 569 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 IL13RA2Q14627 380 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 GRK1Q15835 563 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 LINC00596Q86U02 117 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 CROCCP3Q8IVE0 287 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 OR8H2Q8N162 312 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 TPRX1Q8N7U7 411 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 OR4S1Q8NGB4 309 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 KCNG3Q8TAE7 436 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 TNFRSF14Q92956 283 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 ZDHHC16Q969W1 377 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 NAA50Q9GZZ1 169 aaKnown RBP13.96□□□□□ -0.17
VPS52-215ENST00000464425 METTL8Q9H825 291 aaKnown RBP13.96□□□□□ -0.17
VPS52-215ENST00000464425 FBLN5Q9UBX5 448 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 ST3GAL6Q9Y274 331 aa13.96□□□□□ -0.17
VPS52-215ENST00000464425 A0A1W2PPH5 198 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 DEGS1O15121 323 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 VSIG8P0DPA2 414 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 ZNF44P15621 663 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 PRTN3P24158 256 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 TGFBR1P36897 503 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 RPS19P39019 145 aaKnown RBP13.95□□□□□ -0.18
VPS52-215ENST00000464425 RBM11P57052 281 aaKnown RBP13.95□□□□□ -0.18
VPS52-215ENST00000464425 VBP1P61758 197 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 NCS1P62166 190 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 MXD1Q05195 221 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 OR2W3Q7Z3T1 314 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 CLVS1Q8IUQ0 354 aaPredicted RBP13.95□□□□□ -0.18
VPS52-215ENST00000464425 PNKDQ8N490 385 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 PIP4P2Q8N4L2 257 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 CHST4Q8NCG5 386 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 TMEM104Q8NE00 496 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 RAB2BQ8WUD1 216 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 FAM3DQ96BQ1 224 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 IFT22Q9H7X7 185 aa13.95□□□□□ -0.18
VPS52-215ENST00000464425 A0A0U1RQK1 487 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 A0A1W2PP11 408 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 FAM90A10PA6NDY2 464 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 FAM90A18PA6NE21 464 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 FAM90A16PA6NEW6 464 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 DNAJC9-AS1A6NH13 148 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 FAM90A20PA6NIJ5 464 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 FAM90A8PA6NJQ4 464 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 FAM90A7PA6NKC0 464 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 FAM90A22PA8MWA6 464 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 TMEM14DPA8MWL7 114 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 FAM90A12PA8MX19 464 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 FAM90A5PA8MXJ8 464 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 FAM90A23PA8MXZ1 464 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 CRTAPO75718 401 aaPredicted RBP13.94□□□□□ -0.18
VPS52-215ENST00000464425 CLEC2LP0C7M8 214 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 FAM90A15PP0C7V4 464 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 FAM90A13PP0C7W8 464 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 FAM90A14PP0C7W9 464 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 FAM90A24PP0C7X0 464 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 MGMTP16455 207 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 OR3A1P47881 315 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 UBA52P62987 128 aaKnown RBP13.94□□□□□ -0.18
VPS52-215ENST00000464425 P2RY14Q15391 338 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 MPV17LQ2QL34 196 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 C2orf76Q3KRA6 126 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 HES5Q5TA89 166 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 Q6P435 159 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 SFXN4Q6P4A7 337 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 METAP1DQ6UB28 335 aaPredicted RBP13.94□□□□□ -0.18
VPS52-215ENST00000464425 OR51D1Q8NGF3 324 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 PPP1R35Q8TAP8 253 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 TNFRSF19Q9NS68 423 aa13.94□□□□□ -0.18
VPS52-215ENST00000464425 H3BUI4 141 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 MGST3O14880 152 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 LDLRAD4O15165 306 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 CLDN12P56749 244 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 GUCA2AQ02747 115 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 UNC119Q13432 240 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 SLC9A3R2Q15599 337 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 PIGYQ3MUY2 71 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 NCR3LG1Q68D85 454 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 C11orf42Q8N5U0 333 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 SPATA3Q8NHX4 192 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 FAM216AQ8WUB2 273 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 ZFAND2BQ8WV99 257 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 PTX4Q96A99 478 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 SLC25A46Q96AG3 418 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 Q96M66 194 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 PPA2Q9H2U2 334 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 BANF2Q9H503 90 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 UNKLQ9H9P5 680 aaKnown RBP13.93□□□□□ -0.18
VPS52-215ENST00000464425 LIN7BQ9HAP6 207 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 ING3Q9NXR8 418 aa13.93□□□□□ -0.18
VPS52-215ENST00000464425 DNHD1Q96M86 4753 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 hCG_1809904A0A1W2PP81 198 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 A0A1W2PPE2 198 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 A0A1W2PR64 198 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 A0A1W2PRV1 198 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 hADV38S2A0JD32 116 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 SMIM30A4D0T7 59 aa13.92□□□□□ -0.18
VPS52-215ENST00000464425 SLC33A1O00400 549 aaPredicted RBP13.92□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms