RNA–Protein interactions for RNA: ENST00000464362.5

HPS4-208, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 5

Gene HPS4, Length 4,277 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-208ENST00000464362 NPIPB9F8W1W9 429 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 SLC25A6P12236 298 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 NTF3P20783 257 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 FGF7P21781 194 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 OR3A1P47881 315 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 RPP30P78346 268 aaKnown RBP7.93□□□□□ -1.14
HPS4-208ENST00000464362 LDLRAD3Q86YD5 345 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 ZNF251Q9BRH9 671 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 TPPP3Q9BW30 176 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 CHST5Q9GZS9 411 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 G6PC2Q9NQR9 355 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 CBY3A6NI87 242 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 OR7C2O60412 319 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 HPP00738 406 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 LPAR6P43657 344 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 GABRA4P48169 554 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 SULT1A1P50225 295 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 UNC119Q13432 240 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 ZNF658BQ4V348 819 aaPredicted RBP7.93□□□□□ -1.14
HPS4-208ENST00000464362 ZNF880Q6PDB4 577 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 BTNL3Q6UXE8 466 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 LRP11Q86VZ4 500 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 MRGPRFQ96AM1 343 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 SAT2Q96F10 170 aaPredicted RBP7.93□□□□□ -1.14
HPS4-208ENST00000464362 SLX1AQ9BQ83 275 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 LIN7CQ9NUP9 197 aaKnown RBP7.93□□□□□ -1.14
HPS4-208ENST00000464362 MTCH1Q9NZJ7 389 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 SCN4AP35499 1836 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 NOTCH4Q99466 2003 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 MAP1LC3B2A6NCE7 125 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 CDIPTO14735 213 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 GATCO43716 136 aaKnown RBP7.93□□□□□ -1.14
HPS4-208ENST00000464362 CD1AP06126 327 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 HOXD4P09016 255 aaPredicted RBP7.93□□□□□ -1.14
HPS4-208ENST00000464362 BCL3P20749 454 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 ARR3P36575 388 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 LSM6P62312 80 aaKnown RBP7.93□□□□□ -1.14
HPS4-208ENST00000464362 SNAI3Q3KNW1 292 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 SLC36A1Q7Z2H8 476 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 HOGA1Q86XE5 327 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 TPRX1Q8N7U7 411 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 APCDD1LQ8NCL9 501 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 ZNF439Q8NDP4 499 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 ZNF519Q8TB69 540 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 MRGPRDQ8TDS7 321 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 GFI1Q99684 422 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 VPS25Q9BRG1 176 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 MAP1LC3BQ9GZQ8 125 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 B3GAT1Q9P2W7 334 aa7.93□□□□□ -1.14
HPS4-208ENST00000464362 RBFOX3A6NFN3 312 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 EFEMP2O95967 443 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 IGKV3-11P04433 115 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 KLK2P20151 261 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 ATP6V0CP27449 155 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 UBE2V2Q15819 145 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 C1orf100Q5SVJ3 147 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 GALMQ96C23 342 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 FAM103A1Q9BTL3 118 aaKnown RBP7.92□□□□□ -1.14
HPS4-208ENST00000464362 RIMS4Q9H426 269 aaPredicted RBP7.92□□□□□ -1.14
HPS4-208ENST00000464362 RCC2Q9P258 522 aaKnown RBP7.92□□□□□ -1.14
HPS4-208ENST00000464362 PSG11Q9UQ72 335 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 YIF1AO95070 293 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 EWSR1Q01844 656 aaKnown RBP eCLIP7.92□□□□□ -1.14
HPS4-208ENST00000464362 ZNF92Q03936 586 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 ZNF90Q03938 601 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 OVCH2Q7RTZ1 564 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 OR2Y1Q8NGV0 311 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 SCARF2Q96GP6 870 aaPredicted RBP7.92□□□□□ -1.14
HPS4-208ENST00000464362 SEC11CQ9BY50 192 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 SLC26A1Q9H2B4 701 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 FAM206AQ9NX38 181 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 DCAF16Q9NXF7 216 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 HSF4Q9ULV5 492 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 KLF13Q9Y2Y9 288 aaPredicted RBP7.92□□□□□ -1.14
HPS4-208ENST00000464362 LRP5LA4QPB2 252 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 M0R1X1 148 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 LYPD3O95274 346 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 FSTP19883 344 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 TNFSF4P23510 183 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 SRD5A2P31213 254 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 CD200P41217 278 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 MAGEA5P43359 124 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 ERVS71-1P61550 626 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 H3F3AP84243 136 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 CXorf66Q5JRM2 361 aaPredicted RBP7.92□□□□□ -1.14
HPS4-208ENST00000464362 C22orf15Q8WYQ4 148 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 OR51I2Q9H344 312 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 MSL2Q9HCI7 577 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 TREM2Q9NZC2 230 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 C3orf80F5H4A9 247 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 TRAF3IP2O43734 574 aaPredicted RBP7.92□□□□□ -1.14
HPS4-208ENST00000464362 COX5AP20674 150 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 MPGP29372 298 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 ZNF345Q14585 488 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 IL11RAQ14626 422 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 HIKESHIQ53FT3 197 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 PRR27Q6MZM9 219 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 ETV3LQ6ZN32 361 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 SNX22Q96L94 193 aa7.92□□□□□ -1.14
HPS4-208ENST00000464362 ACTR3CQ9C0K3 210 aaPredicted RBP7.92□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.8 ms