RNA–Protein interactions for RNA: ENST00000464168.5

USP4-208, Transcript of ubiquitin specific peptidase 4, humanhuman

TSL 4

Gene USP4, Length 601 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP4-208ENST00000464168 CCR9P51686 369 aa17.88■□□□□ 0.45
USP4-208ENST00000464168 C8orf86Q6ZUL3 223 aa17.88■□□□□ 0.45
USP4-208ENST00000464168 DRAM1Q8N682 238 aa17.88■□□□□ 0.45
USP4-208ENST00000464168 C5orf56Q8N8D9 126 aa17.88■□□□□ 0.45
USP4-208ENST00000464168 CHPT1Q8WUD6 406 aa17.88■□□□□ 0.45
USP4-208ENST00000464168 LEAP2Q969E1 77 aa17.88■□□□□ 0.45
USP4-208ENST00000464168 TOMM40LQ969M1 308 aa17.88■□□□□ 0.45
USP4-208ENST00000464168 MCRIP2Q9BUT9 160 aaKnown RBP17.88■□□□□ 0.45
USP4-208ENST00000464168 RIBC2Q9H4K1 309 aa17.88■□□□□ 0.45
USP4-208ENST00000464168 STAB2Q8WWQ8 2551 aa17.88■□□□□ 0.45
USP4-208ENST00000464168 J3QR06 171 aa17.87■□□□□ 0.45
USP4-208ENST00000464168 J3QRE1 110 aa17.87■□□□□ 0.45
USP4-208ENST00000464168 SLC16A6O15403 523 aa17.87■□□□□ 0.45
USP4-208ENST00000464168 IGHV3-7P01780 117 aa17.87■□□□□ 0.45
USP4-208ENST00000464168 DIAPH2-AS1Q14236 149 aa17.87■□□□□ 0.45
USP4-208ENST00000464168 OR51T1Q8NGJ9 327 aa17.87■□□□□ 0.45
USP4-208ENST00000464168 OR13C3Q8NGS6 347 aa17.87■□□□□ 0.45
USP4-208ENST00000464168 P2RX4Q99571 388 aa17.87■□□□□ 0.45
USP4-208ENST00000464168 LINC00574Q9H8X3 128 aa17.87■□□□□ 0.45
USP4-208ENST00000464168 ZFP57Q9NU63 452 aa17.87■□□□□ 0.45
USP4-208ENST00000464168 MYRFQ9Y2G1 1151 aa17.87■□□□□ 0.45
USP4-208ENST00000464168 AMMECR1Q9Y4X0 333 aaPredicted RBP17.87■□□□□ 0.45
USP4-208ENST00000464168 AP4S1Q9Y587 144 aa17.87■□□□□ 0.45
USP4-208ENST00000464168 A0A1W2PPI3 338 aa17.86■□□□□ 0.45
USP4-208ENST00000464168 OR4C45A6NMZ5 311 aa17.86■□□□□ 0.45
USP4-208ENST00000464168 HTR1AP08908 422 aa17.86■□□□□ 0.45
USP4-208ENST00000464168 TMEM225BP0DP42 221 aa17.86■□□□□ 0.45
USP4-208ENST00000464168 MYCNOSP40205 109 aa17.86■□□□□ 0.45
USP4-208ENST00000464168 ZP1P60852 638 aa17.86■□□□□ 0.45
USP4-208ENST00000464168 ZNF565Q8N9K5 539 aa17.86■□□□□ 0.45
USP4-208ENST00000464168 OR13A1Q8NGR1 328 aa17.86■□□□□ 0.45
USP4-208ENST00000464168 ZCCHC4Q9H5U6 513 aa17.86■□□□□ 0.45
USP4-208ENST00000464168 CALYQ9NYX4 217 aa17.86■□□□□ 0.45
USP4-208ENST00000464168 KIF25Q9UIL4 384 aa17.86■□□□□ 0.45
USP4-208ENST00000464168 LINC00527Q9UJ94 153 aa17.86■□□□□ 0.45
USP4-208ENST00000464168 PSG11Q9UQ72 335 aa17.86■□□□□ 0.45
USP4-208ENST00000464168 DAPL1A0PJW8 107 aa17.85■□□□□ 0.45
USP4-208ENST00000464168 SERPINE3A8MV23 424 aa17.85■□□□□ 0.45
USP4-208ENST00000464168 TMEM11P17152 192 aa17.85■□□□□ 0.45
USP4-208ENST00000464168 SLC6A1P30531 599 aa17.85■□□□□ 0.45
USP4-208ENST00000464168 GLP1RP43220 463 aa17.85■□□□□ 0.45
USP4-208ENST00000464168 BNIP1Q12981 228 aa17.85■□□□□ 0.45
USP4-208ENST00000464168 MADCAM1Q13477 382 aa17.85■□□□□ 0.45
USP4-208ENST00000464168 HES1Q14469 280 aa17.85■□□□□ 0.45
USP4-208ENST00000464168 HNF4GQ14541 408 aa17.85■□□□□ 0.45
USP4-208ENST00000464168 PELI1Q96FA3 418 aa17.85■□□□□ 0.45
USP4-208ENST00000464168 NCOR1P1Q9H4R4 102 aa17.85■□□□□ 0.45
USP4-208ENST00000464168 IDI2-AS1Q9NZ38 188 aa17.85■□□□□ 0.45
USP4-208ENST00000464168 MEIKINA0A087WXM9 373 aa17.84■□□□□ 0.45
USP4-208ENST00000464168 TRAV24A0A0B4J272 114 aa17.84■□□□□ 0.45
USP4-208ENST00000464168 NUDT19A8MXV4 375 aa17.84■□□□□ 0.45
USP4-208ENST00000464168 H0YJX3 145 aa17.84■□□□□ 0.45
USP4-208ENST00000464168 HSPB6O14558 160 aa17.84■□□□□ 0.45
USP4-208ENST00000464168 FGF16O43320 207 aa17.84■□□□□ 0.45
USP4-208ENST00000464168 KISS1Q15726 138 aa17.84■□□□□ 0.45
USP4-208ENST00000464168 KLHL30-AS1Q8NEE0 82 aa17.84■□□□□ 0.45
USP4-208ENST00000464168 TRUB1Q8WWH5 349 aaKnown RBP17.84■□□□□ 0.45
USP4-208ENST00000464168 RNFT2Q96EX2 444 aa17.84■□□□□ 0.45
USP4-208ENST00000464168 OSBPL10Q9BXB5 764 aa17.84■□□□□ 0.45
USP4-208ENST00000464168 OAZ3Q9UMX2 235 aa17.84■□□□□ 0.45
USP4-208ENST00000464168 NPIPB11E5RHQ5 1161 aa17.83■□□□□ 0.44
USP4-208ENST00000464168 J3QLW9 94 aa17.83■□□□□ 0.44
USP4-208ENST00000464168 IL1AP01583 271 aa17.83■□□□□ 0.44
USP4-208ENST00000464168 IGHG2P01859 326 aa17.83■□□□□ 0.44
USP4-208ENST00000464168 DBTP11182 482 aaKnown RBP17.83■□□□□ 0.44
USP4-208ENST00000464168 ZNF19P17023 458 aa17.83■□□□□ 0.44
USP4-208ENST00000464168 C21orf33P30042 268 aaPredicted RBP17.83■□□□□ 0.44
USP4-208ENST00000464168 MTNR1BP49286 362 aa17.83■□□□□ 0.44
USP4-208ENST00000464168 DCTN2Q13561 401 aaKnown RBP17.83■□□□□ 0.44
USP4-208ENST00000464168 ALKBH1Q13686 389 aaKnown RBP17.83■□□□□ 0.44
USP4-208ENST00000464168 PAN3Q58A45 887 aaKnown RBP17.83■□□□□ 0.44
USP4-208ENST00000464168 ELP2Q6IA86 826 aa17.83■□□□□ 0.44
USP4-208ENST00000464168 UNQ9370/PRO34162Q6UXP9 181 aa17.83■□□□□ 0.44
USP4-208ENST00000464168 RFESDQ8TAC1 157 aa17.83■□□□□ 0.44
USP4-208ENST00000464168 HAVCR2Q8TDQ0 301 aa17.83■□□□□ 0.44
USP4-208ENST00000464168 DUX3Q96PT4 197 aa17.83■□□□□ 0.44
USP4-208ENST00000464168 NR1H4Q96RI1 486 aaPredicted RBP17.83■□□□□ 0.44
USP4-208ENST00000464168 LINC01548A6NM66 108 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 H0YHG0 523 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 IGKV1D-33P01593 117 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 IGKV1-33P01594 117 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 HCKP08631 526 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 FCGR1AP12314 374 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 RAB7AP51149 207 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 DGCR2P98153 550 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 LTC4SQ16873 150 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 SLC25A30Q5SVS4 291 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 SLC35E3Q7Z769 313 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 ZNF695Q8IW36 515 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 OR8H3Q8N146 312 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 COMMD1Q8N668 190 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 ACBD7Q8N6N7 88 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 OR5D14Q8NGL3 314 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 CNIH3Q8TBE1 160 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 CENPNQ96H22 339 aaPredicted RBP17.82■□□□□ 0.44
USP4-208ENST00000464168 C4orf36Q96KX1 117 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 BARHL1Q9BZE3 327 aa17.82■□□□□ 0.44
USP4-208ENST00000464168 SULT1B1O43704 296 aa17.81■□□□□ 0.44
USP4-208ENST00000464168 GNG10P50151 68 aa17.81■□□□□ 0.44
USP4-208ENST00000464168 SLC35B1P78383 322 aa17.81■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms