RNA–Protein interactions for RNA: ENST00000463615.1

PDLIM4-205, Transcript of PDZ and LIM domain 4, humanhuman

TSL 2

Gene PDLIM4, Length 582 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-205ENST00000463615 BEAN1Q3B7T3 259 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 NHLRC3Q5JS37 347 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 SAMD5Q5TGI4 173 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 XAF1Q6GPH4 301 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 AKR1E2Q96JD6 320 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 PPIL3Q9H2H8 161 aaKnown RBP16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 IFT22Q9H7X7 185 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 IL36GQ9NZH8 169 aa16.45■□□□□ 0.22
PDLIM4-205ENST00000463615 PLXNB1O43157 2135 aa16.44■□□□□ 0.22
PDLIM4-205ENST00000463615 CD28P10747 220 aa16.44■□□□□ 0.22
PDLIM4-205ENST00000463615 ETV1P50549 477 aa16.44■□□□□ 0.22
PDLIM4-205ENST00000463615 PRRX1P54821 245 aa16.44■□□□□ 0.22
PDLIM4-205ENST00000463615 ATXN7L3Q14CW9 347 aaPredicted RBP16.44■□□□□ 0.22
PDLIM4-205ENST00000463615 TPTE2P1Q5T6R2 138 aa16.44■□□□□ 0.22
PDLIM4-205ENST00000463615 TMPRSS11AQ6ZMR5 421 aa16.44■□□□□ 0.22
PDLIM4-205ENST00000463615 ZNF565Q8N9K5 539 aa16.44■□□□□ 0.22
PDLIM4-205ENST00000463615 TNFAIP8L1Q8WVP5 186 aa16.44■□□□□ 0.22
PDLIM4-205ENST00000463615 TMEM106AQ96A25 262 aa16.44■□□□□ 0.22
PDLIM4-205ENST00000463615 KIRREL1Q96J84 757 aa16.44■□□□□ 0.22
PDLIM4-205ENST00000463615 C8orf4Q9NR00 106 aa16.44■□□□□ 0.22
PDLIM4-205ENST00000463615 DIMT1Q9UNQ2 313 aaKnown RBP16.44■□□□□ 0.22
PDLIM4-205ENST00000463615 NPIPB11E5RHQ5 1161 aa16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 OR2F2O95006 317 aa16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 VDAC2P45880 294 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 SOX2P48431 317 aa16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 PAN3Q58A45 887 aaKnown RBP16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 RSBN1Q5VWQ0 802 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 HIST2H2BDQ6DRA6 164 aa16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 CCDC144NLQ6NUI1 221 aa16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 OR9G1Q8NH87 305 aa16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 SMIM19Q96E16 107 aa16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 GPER1Q99527 375 aa16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 BARHL1Q9BZE3 327 aa16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 TMEM138Q9NPI0 162 aa16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 BABAM2Q9NXR7 383 aa16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 TAS2R4Q9NYW5 299 aa16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 ZKSCAN7Q9P0L1 754 aaPredicted RBP16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 EXOSC1Q9Y3B2 195 aaKnown RBP16.43■□□□□ 0.22
PDLIM4-205ENST00000463615 NOTCH3Q9UM47 2321 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 TOR1AO14656 332 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 GPX5O75715 221 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 BAG2O95816 211 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 C21orf33P30042 268 aaPredicted RBP16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 RSU1Q15404 277 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 OR2G6Q5TZ20 316 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 TTC23Q5W5X9 447 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 SLC16A12Q6ZSM3 486 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 C1QL4Q86Z23 238 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 PACRGLQ8N7B6 248 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 OR10A7Q8NGE5 316 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 OR13A1Q8NGR1 328 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 RBM14Q96PK6 669 aaKnown RBP16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 CITED2Q99967 270 aaPredicted RBP16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 MMP28Q9H239 520 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 PCDHB16Q9NRJ7 776 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 CALYQ9NYX4 217 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 KIF25Q9UIL4 384 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 ZNF281Q9Y2X9 895 aa16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 SIRT4Q9Y6E7 314 aaPredicted RBP16.42■□□□□ 0.22
PDLIM4-205ENST00000463615 MEIKINA0A087WXM9 373 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 TRBV5-5A0A0J9YX44 114 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 FAM90A18PA6NE21 464 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 FAM90A16PA6NEW6 464 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 FAM90A20PA6NIJ5 464 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 FAM90A9PA6NNJ1 464 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 FAM90A12PA8MX19 464 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 FAM90A5PA8MXJ8 464 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 G3V4G9 280 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 XPNPEP2O43895 674 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 PEX14O75381 377 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 IL1AP01583 271 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 FAM90A15PP0C7V4 464 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 FAM90A13PP0C7W8 464 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 FAM90A14PP0C7W9 464 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 FAM90A24PP0C7X0 464 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 CD83Q01151 205 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 UTF1Q5T230 341 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 THNSL2Q86YJ6 484 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 ZNF485Q8NCK3 441 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 OR4F17Q8NGA8 305 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 OR52N1Q8NH53 320 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 STMN2Q93045 179 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 OR4F4Q96R69 305 aa16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 NR1H4Q96RI1 486 aaPredicted RBP16.41■□□□□ 0.22
PDLIM4-205ENST00000463615 FAM172BPA6NC97 362 aa16.4■□□□□ 0.22
PDLIM4-205ENST00000463615 M0QZK8 103 aa16.4■□□□□ 0.22
PDLIM4-205ENST00000463615 AMY1AP04745 511 aa16.4■□□□□ 0.22
PDLIM4-205ENST00000463615 AMY2AP04746 511 aa16.4■□□□□ 0.22
PDLIM4-205ENST00000463615 IGFBP3P17936 291 aaPredicted RBP16.4■□□□□ 0.22
PDLIM4-205ENST00000463615 MYL12AP19105 171 aa16.4■□□□□ 0.22
PDLIM4-205ENST00000463615 MNDAP41218 407 aa16.4■□□□□ 0.22
PDLIM4-205ENST00000463615 ADARB1P78563 741 aaKnown RBP16.4■□□□□ 0.22
PDLIM4-205ENST00000463615 PIGYQ3MUY2 71 aa16.4■□□□□ 0.22
PDLIM4-205ENST00000463615 DMKNQ6E0U4 476 aaPredicted RBP16.4■□□□□ 0.22
PDLIM4-205ENST00000463615 LINC00596Q86U02 117 aa16.4■□□□□ 0.22
PDLIM4-205ENST00000463615 SATL1Q86VE3 508 aa16.4■□□□□ 0.22
PDLIM4-205ENST00000463615 PLPPR1Q8TBJ4 325 aa16.4■□□□□ 0.22
PDLIM4-205ENST00000463615 SLC25A33Q9BSK2 321 aa16.4■□□□□ 0.22
PDLIM4-205ENST00000463615 IDI2-AS1Q9NZ38 188 aa16.4■□□□□ 0.22
PDLIM4-205ENST00000463615 AMMECR1Q9Y4X0 333 aaPredicted RBP16.4■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms