RNA–Protein interactions for RNA: ENST00000462613.1

SF3B1-206, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 3

Gene SF3B1, Length 141 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-206ENST00000462613 PDCD6O75340 191 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 CRLF1O75462 422 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 GABARAPO95166 117 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 RBP4P02753 201 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 TFF1P04155 84 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 FAM157CP0CG43 387 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 DUX4L2P0CJ85 424 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 DUX4L3P0CJ86 424 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 DUX4L4P0CJ87 422 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 DUX4L5P0CJ88 424 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 DUX4L6P0CJ89 424 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 DUX4L7P0CJ90 424 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 ZNF728P0DKX0 622 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 CD37P11049 281 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 RAB6AP20340 208 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 CFPP27918 469 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 BLVRBP30043 206 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-206ENST00000462613 GLP1RP43220 463 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 OR3A1P47881 315 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 ALDH3B2P48448 385 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 RORCP51449 518 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 LGALS4P56470 323 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 CLDN12P56749 244 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 OR10A3P58181 314 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 AESQ08117 197 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 C2orf76Q3KRA6 126 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 C6orf183Q5T699 404 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 GPR107Q5VW38 600 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 SLC35E4Q6ICL7 350 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 Q6P435 159 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 MZT2AQ6P582 158 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 DUX4L9Q6RFH8 374 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-206ENST00000462613 C17orf107Q6ZR85 190 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 LYPD6Q86Y78 171 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 CLVS1Q8IUQ0 354 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-206ENST00000462613 BPIFB2Q8N4F0 458 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 SUMF2Q8NBJ7 301 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 LY6G5BQ8NDX9 201 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 TMEM104Q8NE00 496 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 OR4S1Q8NGB4 309 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 OR13D1Q8NGV5 346 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 ZNF418Q8TF45 676 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-206ENST00000462613 PTX4Q96A99 478 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 UPRTQ96BW1 309 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 JMJD8Q96S16 334 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 TM2D1Q9BX74 207 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 TMPRSS13Q9BYE2 586 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 RIMS4Q9H426 269 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-206ENST00000462613 NCOR1P1Q9H4R4 102 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 HEXA-AS1Q9H8Q6 139 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 CHMP1AQ9HD42 196 aaPredicted RBP5.27□□□□□ -1.57
SF3B1-206ENST00000462613 C19orf12Q9NSK7 152 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 ING3Q9NXR8 418 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 ETAA1Q9NY74 926 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 TAS2R3Q9NYW6 316 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 KCNIP1Q9NZI2 227 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 ABRACLQ9P1F3 81 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 DUX4Q9UBX2 424 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 FBLN5Q9UBX5 448 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 TRAPPC2LQ9UL33 140 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 MGAT4AQ9UM21 535 aa5.27□□□□□ -1.57
SF3B1-206ENST00000462613 TRAV24A0A0B4J272 114 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 TMEM272A0A1B0GTI8 110 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 SMIM31A0A1B0GVY4 71 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 SMIM30A4D0T7 59 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 CLPXO76031 633 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 PAHP00439 452 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 TFAP2AP05549 437 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 CD3GP09693 182 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 GZMHP20718 246 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 PRTN3P24158 256 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 GLIPR1P48060 266 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 VEGFCP49767 419 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 ARHGDIBP52566 201 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 TMBIM6P55061 237 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 VBP1P61758 197 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 PAX5Q02548 391 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 PAX2Q02962 417 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 ARFRP1Q13795 201 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 TMEM30BQ3MIR4 351 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 OR10K2Q6IF99 312 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 METAP1DQ6UB28 335 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-206ENST00000462613 Q6ZTK2 550 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 VMO1Q7Z5L0 202 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 LURAP1LQ8IV03 231 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 FGFRL1Q8N441 504 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 TPRX1Q8N7U7 411 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 LGALS14Q8TCE9 139 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 ACOT12Q8WYK0 555 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 LHX4Q969G2 390 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 SLC25A28Q96A46 364 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 KCTD12Q96CX2 325 aaKnown RBP5.26□□□□□ -1.57
SF3B1-206ENST00000462613 RAB3CQ96E17 227 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 C1orf147Q96MC9 270 aaPredicted RBP5.26□□□□□ -1.57
SF3B1-206ENST00000462613 ATG5Q9H1Y0 275 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 DCSTAMPQ9H295 470 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 OCEL1Q9H607 264 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 DIABLOQ9NR28 239 aa5.26□□□□□ -1.57
SF3B1-206ENST00000462613 RCC2Q9P258 522 aaKnown RBP5.26□□□□□ -1.57
SF3B1-206ENST00000462613 OPN4Q9UHM6 478 aa5.26□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms