RNA–Protein interactions for RNA: ENST00000462553.2

CDC42BPA-210, Transcript of CDC42 binding protein kinase alpha, humanhuman

TSL 5

Gene CDC42BPA, Length 430 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42BPA-210ENST00000462553 LRRC75BQ2VPJ9 315 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 OXLD1Q5BKU9 147 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 SPIN3Q5JUX0 258 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 DDI2Q5TDH0 399 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 ELP2Q6IA86 826 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 REC114Q7Z4M0 266 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 LYG1Q8N1E2 194 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 Q8NFD4 153 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 OR4S1Q8NGB4 309 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 OR4C13Q8NGP0 309 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 DERL3Q96Q80 235 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 SSX3Q99909 188 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 MEGF9Q9H1U4 602 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 RANBP3Q9H6Z4 567 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 METTL8Q9H825 291 aaKnown RBP6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 ZNF702PQ9H963 129 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 RHOFQ9HBH0 211 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 SERTAD4Q9NUC0 356 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 AURKAIP1Q9NWT8 199 aaPredicted RBP6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 IL36GQ9NZH8 169 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 ERGIC3Q9Y282 383 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 GSTK1Q9Y2Q3 226 aa6.4□□□□□ -1.38
CDC42BPA-210ENST00000462553 RYR2Q92736 4967 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 A0A1W2PP11 408 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 A0A1W2PPK0 400 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 C17orf98A8MV24 154 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 SLC33A1O00400 549 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 SC5DO75845 299 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 OCMP0CE72 109 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 TMEM225BP0DP42 221 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 GABRR1P24046 479 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 LMO1P25800 156 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 MAP2K4P45985 399 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 MTNR1BP49286 362 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 EDDM3AQ14507 147 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 HABP2Q14520 560 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 SPHARQ15513 63 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 GRK1Q15835 563 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 AANATQ16613 207 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 PIGYQ3MUY2 71 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 FAM27D1Q5T7N8 215 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 C11orf88Q6PI97 169 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 UNQ9370/PRO34162Q6UXP9 181 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 SATL1Q86VE3 508 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 DYNAPQ8N1N2 210 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 TPRX1Q8N7U7 411 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 OR51T1Q8NGJ9 327 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 OR10K1Q8NGX5 313 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 MRAPQ8TCY5 172 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 TNFAIP8L1Q8WVP5 186 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 MYDGFQ969H8 173 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 PHF21AQ96BD5 680 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 COQ2Q96H96 371 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 CNBD2Q96M20 576 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 ZNF184Q99676 751 aaPredicted RBP6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 LYSTQ99698 3801 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 MMP28Q9H239 520 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 PPIL3Q9H2H8 161 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 NEK6Q9HC98 313 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 EXOSC4Q9NPD3 245 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 TMEM138Q9NPI0 162 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 SCN3BQ9NY72 215 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 RAB26Q9ULW5 256 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 RRP15Q9Y3B9 282 aaKnown RBP6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 TPRKBQ9Y3C4 175 aa6.39□□□□□ -1.39
CDC42BPA-210ENST00000462553 TRAV24A0A0B4J272 114 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 ODF3BA8MYP8 253 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 MGST3O14880 152 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 RGS10O43665 173 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 CDRT1O95170 752 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 RBP4P02753 201 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 CSN2P05814 226 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 ZNF728P0DKX0 622 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 VSIG10L2P0DP72 767 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 CD28P10747 220 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 ERP29P30040 261 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 ZNF93P35789 620 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 PTGFRP43088 359 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 BMXP51813 675 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 P2RX3P56373 397 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 EDDM3BP56851 147 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 PPP3R1P63098 170 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 MEF2CQ06413 473 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 IL13RA2Q14627 380 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 TBCEQ15813 527 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 NSUN5P1Q3KNT7 163 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 NHLRC3Q5JS37 347 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 RBM48Q5RL73 367 aaKnown RBP6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 LDLRAD2Q5SZI1 272 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 ZNF782Q6ZMW2 699 aaPredicted RBP6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 GDPD3Q7L5L3 318 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 PRSS48Q7RTY5 328 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 Q8N2B8 174 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 OR5D13Q8NGL4 314 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 OR2T6Q8NHC8 308 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 CYYR1Q96J86 154 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 GPER1Q99527 375 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 FAM192AQ9GZU8 254 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 NECAP2Q9NVZ3 263 aa6.38□□□□□ -1.39
CDC42BPA-210ENST00000462553 SF3B6Q9Y3B4 125 aaKnown RBP6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 154.7 ms