RNA–Protein interactions for RNA: ENST00000462030.5

HPS3-204, Transcript of HPS3, biogenesis of lysosomal organelles complex 2 subunit 1, humanhuman

TSL 2

Gene HPS3, Length 2,486 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS3-204ENST00000462030 A0A087WZY1 265 aa15.89■□□□□ 0.13
HPS3-204ENST00000462030 TRGC2P03986 189 aa15.89■□□□□ 0.13
HPS3-204ENST00000462030 HSPB1P04792 205 aaKnown RBP15.89■□□□□ 0.13
HPS3-204ENST00000462030 KLK3P07288 261 aaPredicted RBP15.89■□□□□ 0.13
HPS3-204ENST00000462030 HAAOP46952 286 aa15.89■□□□□ 0.13
HPS3-204ENST00000462030 GPR137CQ8N3F9 429 aa15.89■□□□□ 0.13
HPS3-204ENST00000462030 SIGLEC12Q96PQ1 595 aa15.89■□□□□ 0.13
HPS3-204ENST00000462030 ALKBH3Q96Q83 286 aaPredicted RBP15.89■□□□□ 0.13
HPS3-204ENST00000462030 NIPSNAP3BQ9BS92 247 aa15.89■□□□□ 0.13
HPS3-204ENST00000462030 C19orf25Q9UFG5 118 aaPredicted RBP15.89■□□□□ 0.13
HPS3-204ENST00000462030 CA14Q9ULX7 337 aa15.89■□□□□ 0.13
HPS3-204ENST00000462030 hCG_38984A0A1B0GV85 526 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 LY86O95711 162 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 SOD3P08294 240 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 FUT3P21217 361 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 AKR1C8PQ5T2L2 129 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 CPNE4Q96A23 557 aaPredicted RBP15.88■□□□□ 0.13
HPS3-204ENST00000462030 SPIN2AQ99865 258 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 SPIN2BQ9BPZ2 258 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 CALHM2Q9HA72 323 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 PROK2Q9HC23 129 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 WNT16Q9UBV4 365 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 NOSIPQ9Y314 301 aaKnown RBP15.88■□□□□ 0.13
HPS3-204ENST00000462030 LIFP15018 202 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 GPX4P36969 197 aaPredicted RBP15.88■□□□□ 0.13
HPS3-204ENST00000462030 FUT6P51993 359 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 ZNF468Q5VIY5 522 aaPredicted RBP15.88■□□□□ 0.13
HPS3-204ENST00000462030 GAPTQ8N292 157 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 FGFBP3Q8TAT2 258 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 PLPPR1Q8TBJ4 325 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 GPR61Q9BZJ8 451 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 DKKL1Q9UK85 242 aa15.88■□□□□ 0.13
HPS3-204ENST00000462030 IGKV1D-13A0A0B4J2D9 117 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 OR6C6A6NF89 314 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 IGKV1-13P0DP09 117 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 GLIPR1P48060 266 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 RPL23AP62750 156 aaKnown RBP15.87■□□□□ 0.13
HPS3-204ENST00000462030 RAB30Q15771 203 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 NMSQ5H8A3 153 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 CMTM1Q8IZ96 169 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 FAM185AQ8N0U4 392 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 IL22RA1Q8N6P7 574 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 ZNF611Q8N823 705 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 INTS12Q96CB8 462 aaKnown RBP15.87■□□□□ 0.13
HPS3-204ENST00000462030 GNPNAT1Q96EK6 184 aaPredicted RBP15.87■□□□□ 0.13
HPS3-204ENST00000462030 TMEM38BQ9NVV0 291 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 CST2P09228 141 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 PSG4Q00888 419 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 PCOLCEQ15113 449 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 SLC25A26Q70HW3 274 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 PRDM13Q9H4Q3 707 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 PLSCR2Q9NRY7 297 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 TCFL5Q9UL49 500 aa15.87■□□□□ 0.13
HPS3-204ENST00000462030 ZNF587BE7ETH6 402 aa15.86■□□□□ 0.13
HPS3-204ENST00000462030 CHST1O43916 411 aa15.86■□□□□ 0.13
HPS3-204ENST00000462030 SCTP09683 121 aa15.86■□□□□ 0.13
HPS3-204ENST00000462030 ID3Q02535 119 aa15.86■□□□□ 0.13
HPS3-204ENST00000462030 GUSBP11Q6P575 273 aa15.86■□□□□ 0.13
HPS3-204ENST00000462030 HIST3H2BBQ8N257 126 aa15.86■□□□□ 0.13
HPS3-204ENST00000462030 EXTL1Q92935 676 aa15.86■□□□□ 0.13
HPS3-204ENST00000462030 OPA3Q9H6K4 179 aa15.86■□□□□ 0.13
HPS3-204ENST00000462030 SIRT7Q9NRC8 400 aa15.86■□□□□ 0.13
HPS3-204ENST00000462030 PTRH2Q9Y3E5 179 aaKnown RBP15.86■□□□□ 0.13
HPS3-204ENST00000462030 A0A1W2PQM1 296 aa15.86■□□□□ 0.13
HPS3-204ENST00000462030 SEC14L6B5MCN3 397 aa15.86■□□□□ 0.13
HPS3-204ENST00000462030 TOX3O15405 576 aaPredicted RBP15.86■□□□□ 0.13
HPS3-204ENST00000462030 GDF9O60383 454 aa15.86■□□□□ 0.13
HPS3-204ENST00000462030 DSCR4P56555 118 aaPredicted RBP15.86■□□□□ 0.13
HPS3-204ENST00000462030 KHDC3LQ587J8 217 aa15.86■□□□□ 0.13
HPS3-204ENST00000462030 RHOVQ96L33 236 aa15.86■□□□□ 0.13
HPS3-204ENST00000462030 CXorf65A6NEN9 183 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 PAX9P55771 341 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 HERPUD1Q15011 391 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 KRTAP27-1Q3LI81 207 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 SLC35E3Q7Z769 313 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 RBMXL1Q96E39 390 aaKnown RBP15.85■□□□□ 0.13
HPS3-204ENST00000462030 SLC22A20A6NK97 555 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 H3BP45 60 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 RPL36A-HNRNPH2H7BZ11 118 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 BCAT2O15382 392 aaPredicted RBP15.85■□□□□ 0.13
HPS3-204ENST00000462030 CEACAM1P13688 526 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 NKX6-1P78426 367 aaPredicted RBP15.85■□□□□ 0.13
HPS3-204ENST00000462030 HLA-DRB3P79483 266 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 DEFA6Q01524 100 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 TLE4Q04727 773 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 HS3ST6Q96QI5 342 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 ATP5SQ99766 215 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 WNT5BQ9H1J7 359 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 CCL28Q9NRJ3 127 aa15.85■□□□□ 0.13
HPS3-204ENST00000462030 IGHV5-10-1A0A0J9YXX1 117 aa15.84■□□□□ 0.13
HPS3-204ENST00000462030 LOC102723971A0A1B0GUV8 181 aa15.84■□□□□ 0.13
HPS3-204ENST00000462030 PPP1R2P9O14990 202 aa15.84■□□□□ 0.13
HPS3-204ENST00000462030 TNFSF12O43508 249 aa15.84■□□□□ 0.13
HPS3-204ENST00000462030 BAXQ07812 192 aa15.84■□□□□ 0.13
HPS3-204ENST00000462030 MRPL14Q6P1L8 145 aaKnown RBP15.84■□□□□ 0.13
HPS3-204ENST00000462030 ABHD5Q8WTS1 349 aa15.84■□□□□ 0.13
HPS3-204ENST00000462030 FRZBQ92765 325 aa15.84■□□□□ 0.13
HPS3-204ENST00000462030 ABHD14BQ96IU4 210 aa15.84■□□□□ 0.13
HPS3-204ENST00000462030 FAM86C1Q9NVL1 165 aa15.84■□□□□ 0.13
HPS3-204ENST00000462030 TAAR3PQ9P1P4 343 aa15.84■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms