RNA–Protein interactions for RNA: ENST00000461608.1

HDAC6-212, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 397 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-212ENST00000461608 POP7O75817 140 aaKnown RBP1.61□□□□□ -2.15
HDAC6-212ENST00000461608 IGHV3-53P01767 116 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 KDELR2P33947 212 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 RAB25P57735 213 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 RAB8AP61006 207 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 RHOAP61586 193 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 PRKCDQ05655 676 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 FMODQ06828 376 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 TPBGQ13641 420 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 PAFAH1B3Q15102 231 aaKnown RBP1.61□□□□□ -2.15
HDAC6-212ENST00000461608 TMEM241Q24JQ0 296 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 CLEC12BQ2HXU8 276 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 HSP90B2PQ58FF3 399 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 NXNL2Q5VZ03 156 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 AMMECR1LQ6DCA0 310 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 OLIG3Q7RTU3 272 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 LYZL2Q7Z4W2 148 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 MTERF4Q7Z6M4 381 aaKnown RBP1.61□□□□□ -2.15
HDAC6-212ENST00000461608 NIT1Q86X76 327 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 MNS1Q8NEH6 495 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 OR5AK3PQ8NH89 298 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 DGCR8Q8WYQ5 773 aaKnown RBP eCLIP1.61□□□□□ -2.15
HDAC6-212ENST00000461608 OR5P2Q8WZ92 322 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 CCDC127Q96BQ5 260 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 LCE3DQ9BYE3 92 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 MFSD1Q9H3U5 465 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 ZNF492Q9P255 531 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 AK9Q5TCS8 1911 aa1.61□□□□□ -2.15
HDAC6-212ENST00000461608 LRPPRCP42704 1394 aaKnown RBP1.6□□□□□ -2.15
HDAC6-212ENST00000461608 NID2Q14112 1375 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 KIAA0232Q92628 1395 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 TNKS1BP1Q9C0C2 1729 aaKnown RBP1.6□□□□□ -2.15
HDAC6-212ENST00000461608 IQCF5A8MTL0 148 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 H3BP45 60 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 K7EM74 188 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 SCN2BO60939 215 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 YEATS4O95619 227 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 LIMS3P0CW19 117 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 LIMS4P0CW20 117 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 ZNF35P13682 527 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 TGFBR1P36897 503 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 HSPA13P48723 471 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 PLTPP55058 493 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 MAP3K7CLP57077 242 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 OR2B6P58173 313 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 RAB31Q13636 194 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 ZNF235Q14590 738 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 MMDQ15546 238 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 LGALSLQ3ZCW2 172 aaPredicted RBP1.6□□□□□ -2.15
HDAC6-212ENST00000461608 LDLRAD2Q5SZI1 272 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 ZNF470Q6ECI4 717 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 CRLF3Q8IUI8 442 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 FAM9CQ8IZT9 166 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 ZIC4Q8N9L1 334 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 LINC00304Q8N9R0 145 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 ACTL9Q8TC94 416 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 TRIB3Q96RU7 358 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 PAIP2Q9BPZ3 127 aaKnown RBP1.6□□□□□ -2.15
HDAC6-212ENST00000461608 RTBDNQ9BSG5 229 aaPredicted RBP1.6□□□□□ -2.15
HDAC6-212ENST00000461608 PLA2G12AQ9BZM1 189 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 DHX35Q9H5Z1 703 aaKnown RBP1.6□□□□□ -2.15
HDAC6-212ENST00000461608 VSIRQ9H7M9 311 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 RBM12B-AS1Q9P1G2 102 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 ZNF706Q9Y5V0 76 aaPredicted RBP1.6□□□□□ -2.15
HDAC6-212ENST00000461608 SCN4AP35499 1836 aa1.6□□□□□ -2.15
HDAC6-212ENST00000461608 SETD1AO15047 1707 aaKnown RBP1.6□□□□□ -2.15
HDAC6-212ENST00000461608 THADAQ6YHU6 1953 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 SHROOM3Q8TF72 1996 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 VGLL3A8MV65 326 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 C4orf51C9J302 202 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 MKRN2OSH3BPM6 223 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 SYNGR1O43759 233 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 TNFAIP8O95379 198 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 GPR75O95800 540 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 PDYNP01213 254 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 IGLV6-57P01721 117 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 GP1BAP07359 652 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 GUSBP08236 651 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 SPNP16150 400 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 M6PRP20645 277 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 KRTAP10-10P60014 251 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 GTF2BQ00403 316 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 ZCWPW2Q504Y3 356 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 OR10J3Q5JRS4 329 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 SPIN3Q5JUX0 258 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 ZNF660Q6AZW8 331 aaPredicted RBP1.59□□□□□ -2.15
HDAC6-212ENST00000461608 SLC13A5Q86YT5 568 aaPredicted RBP1.59□□□□□ -2.15
HDAC6-212ENST00000461608 ZFP82Q8N141 532 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 GATD1Q8NB37 220 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 ATP6V1C2Q8NEY4 427 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 OR4P4Q8NGL7 312 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 CMTM2Q8TAZ6 248 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 SUN5Q8TC36 379 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 DYNC2LI1Q8TCX1 351 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 CCDC12Q8WUD4 166 aaPredicted RBP1.59□□□□□ -2.15
HDAC6-212ENST00000461608 RBPMSQ93062 196 aaKnown RBP1.59□□□□□ -2.15
HDAC6-212ENST00000461608 CMBLQ96DG6 245 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 PRSS27Q9BQR3 290 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 ZNF251Q9BRH9 671 aa1.59□□□□□ -2.15
HDAC6-212ENST00000461608 TAPBPLQ9BX59 468 aa1.59□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms