RNA–Protein interactions for RNA: ENST00000461437.5

NUP50-213, Transcript of nucleoporin 50, humanhuman

TSL 4

Gene NUP50, Length 531 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP50-213ENST00000461437 TAS2R3Q9NYW6 316 aa12.43□□□□□ -0.42
NUP50-213ENST00000461437 DPM3Q9P2X0 92 aa12.43□□□□□ -0.42
NUP50-213ENST00000461437 MEIKINA0A087WXM9 373 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 A0A1W2PPK0 400 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 FUOMA2VDF0 154 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 MAGEB3O15480 346 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 FBXO24O75426 580 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 IGLV1-47P01700 117 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 CSN2P05814 226 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 GNAO1P09471 354 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 DCKP27707 260 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 DYNLT3P51808 116 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 ADARB1P78563 741 aaKnown RBP12.42□□□□□ -0.42
NUP50-213ENST00000461437 HLA-DRB5Q30154 266 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 LAIR2Q6ISS4 152 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 FAM53AQ6NSI3 398 aaPredicted RBP12.42□□□□□ -0.42
NUP50-213ENST00000461437 Q8N2B8 174 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 CHST4Q8NCG5 386 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 PXT1Q8NFP0 134 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 MRGPRDQ8TDS7 321 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 GGHQ92820 318 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 KIRREL1Q96J84 757 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 RDH12Q96NR8 316 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 CITED2Q99967 270 aaPredicted RBP12.42□□□□□ -0.42
NUP50-213ENST00000461437 PRSS22Q9GZN4 317 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 PITPNC1Q9UKF7 332 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 DIMT1Q9UNQ2 313 aaKnown RBP12.42□□□□□ -0.42
NUP50-213ENST00000461437 NOTCH3Q9UM47 2321 aa12.42□□□□□ -0.42
NUP50-213ENST00000461437 A0A1W2PPE3 182 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 ZNF729A6NN14 1252 aaPredicted RBP12.41□□□□□ -0.42
NUP50-213ENST00000461437 FAM90A22PA8MWA6 464 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 TOR1AO14656 332 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 OGG1O15527 345 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 XPNPEP2O43895 674 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 PRB2P02812 416 aaPredicted RBP12.41□□□□□ -0.42
NUP50-213ENST00000461437 CGB3P0DN86 165 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 CGB7P0DN87 165 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 SERPINA2P20848 420 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 SSTR5P35346 364 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 VDAC2P45880 294 aaPredicted RBP12.41□□□□□ -0.42
NUP50-213ENST00000461437 GNG10P50151 68 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 BDH1Q02338 343 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 DIAPH2-AS1Q14236 149 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 TPTE2P1Q5T6R2 138 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 RSBN1Q5VWQ0 802 aaPredicted RBP12.41□□□□□ -0.42
NUP50-213ENST00000461437 ELP2Q6IA86 826 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 OR52W1Q6IF63 320 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 TMPRSS11AQ6ZMR5 421 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 DHRSXQ8N5I4 330 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 OR4D6Q8NGJ1 314 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 OR51T1Q8NGJ9 327 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 SMIM19Q96E16 107 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 TMEM80Q96HE8 168 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 MMP28Q9H239 520 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 RHOFQ9HBH0 211 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 BABAM2Q9NXR7 383 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 CALYQ9NYX4 217 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 ZNF281Q9Y2X9 895 aa12.41□□□□□ -0.42
NUP50-213ENST00000461437 EXOSC1Q9Y3B2 195 aaKnown RBP12.41□□□□□ -0.42
NUP50-213ENST00000461437 TRAV8-7A0A075B6U6 113 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 KBTBD11-OT1A0A1B0GTJ5 212 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 A0A1W2PRX2 142 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 ADARB2-AS1A8MUL3 147 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 BUB1B-PAK6H3BSN5 160 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 CD2P06729 351 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 MYL12AP19105 171 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 CD34P28906 385 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 BDKRB2P30411 391 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 ZNF93P35789 620 aaPredicted RBP12.4□□□□□ -0.42
NUP50-213ENST00000461437 RPS11P62280 158 aaKnown RBP eCLIP12.4□□□□□ -0.42
NUP50-213ENST00000461437 IL13RA2Q14627 380 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 CCDC58Q4VC31 144 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 C11orf88Q6PI97 169 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 C10orf99Q6UWK7 81 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 RTN4RL2Q86UN3 420 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 SUMF2Q8NBJ7 301 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 ZNF596Q8TC21 504 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 WIPF2Q8TF74 440 aaPredicted RBP12.4□□□□□ -0.42
NUP50-213ENST00000461437 GHSRQ92847 366 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 PGLYRP3Q96LB9 341 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 SLC25A33Q9BSK2 321 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 WNT10AQ9GZT5 417 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.4□□□□□ -0.42
NUP50-213ENST00000461437 ST3GAL6Q9Y274 331 aa12.4□□□□□ -0.42
NUP50-213ENST00000461437 TRBV5-5A0A0J9YX44 114 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 LEUTXA8MZ59 168 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 LY6LH3BQJ8 138 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 GEMIN2O14893 280 aaKnown RBP12.39□□□□□ -0.43
NUP50-213ENST00000461437 PEX14O75381 377 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 OR7C1O76099 320 aaPredicted RBP12.39□□□□□ -0.43
NUP50-213ENST00000461437 IGFBP3P17936 291 aaPredicted RBP12.39□□□□□ -0.43
NUP50-213ENST00000461437 PPP3R1P63098 170 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 ST3GAL4Q11206 333 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 ABCA11PQ4W5N1 156 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 TTC23Q5W5X9 447 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 DMKNQ6E0U4 476 aaPredicted RBP12.39□□□□□ -0.43
NUP50-213ENST00000461437 ASCL4Q6XD76 172 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 OSR2Q8N2R0 312 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 ZNF485Q8NCK3 441 aa12.39□□□□□ -0.43
NUP50-213ENST00000461437 CCDC107Q8WV48 283 aa12.39□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 39.5 ms