RNA–Protein interactions for RNA: ENST00000461347.5

NCL-207, Transcript of nucleolin, humanhuman

TSL 2

Gene NCL, Length 3,967 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCL-207ENST00000461347 A0A1W2PNV4 684 aa12.58□□□□□ -0.4
NCL-207ENST00000461347 SEC14L6B5MCN3 397 aa12.58□□□□□ -0.4
NCL-207ENST00000461347 TERTO14746 1132 aaKnown RBP12.58□□□□□ -0.4
NCL-207ENST00000461347 MLF1P58340 268 aa12.58□□□□□ -0.4
NCL-207ENST00000461347 ZNF383Q8NA42 475 aa12.58□□□□□ -0.4
NCL-207ENST00000461347 OR10D3Q8NH80 312 aa12.58□□□□□ -0.4
NCL-207ENST00000461347 ZNF106Q9H2Y7 1883 aaKnown RBP12.57□□□□□ -0.4
NCL-207ENST00000461347 A0A1W2PR80 420 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 KRASP01116 189 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 ZNF66Q6ZN08 573 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 OR13D1Q8NGV5 346 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 RHBDD1Q8TEB9 315 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 ADGRG7Q96K78 797 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 DIDO1Q9BTC0 2240 aaKnown RBP12.57□□□□□ -0.4
NCL-207ENST00000461347 COL4A3Q01955 1670 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 LAMTOR5O43504 91 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 PDGFBP01127 241 aaPredicted RBP12.57□□□□□ -0.4
NCL-207ENST00000461347 GABRA2P47869 451 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 SUPT4H1P63272 117 aaKnown RBP12.57□□□□□ -0.4
NCL-207ENST00000461347 Q96M66 194 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 OCIAD1Q9NX40 245 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 CLDN16Q9Y5I7 305 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 BRCA2P51587 3418 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 MAP1LC3B2A6NCE7 125 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 NPIPB13A6NJU9 1138 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 NPIPB4C9JG80 1138 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 RAC3P60763 192 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 MYO7BQ6PIF6 2116 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 DMBX1Q8NFW5 382 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 CLDN23Q96B33 292 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 C10orf35Q96D05 121 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 SAMD10Q9BYL1 202 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 MAP1LC3BQ9GZQ8 125 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 GPR27Q9NS67 375 aa12.57□□□□□ -0.4
NCL-207ENST00000461347 ERVK-16P61578 105 aa12.56□□□□□ -0.4
NCL-207ENST00000461347 SIT1Q9Y3P8 196 aa12.56□□□□□ -0.4
NCL-207ENST00000461347 IGKV1D-8A0A087WSZ0 117 aa12.56□□□□□ -0.4
NCL-207ENST00000461347 TRDCB7Z8K6 153 aa12.56□□□□□ -0.4
NCL-207ENST00000461347 FBP1P09467 338 aa12.56□□□□□ -0.4
NCL-207ENST00000461347 DCAF12Q5T6F0 453 aa12.56□□□□□ -0.4
NCL-207ENST00000461347 ZNF573Q86YE8 665 aa12.56□□□□□ -0.4
NCL-207ENST00000461347 OR51M1Q9H341 326 aa12.56□□□□□ -0.4
NCL-207ENST00000461347 KIAA1456Q9P272 454 aa12.56□□□□□ -0.4
NCL-207ENST00000461347 GNG12Q9UBI6 72 aa12.56□□□□□ -0.4
NCL-207ENST00000461347 TP53TG5Q9Y2B4 290 aa12.56□□□□□ -0.4
NCL-207ENST00000461347 CLPSP04118 112 aa12.56□□□□□ -0.4
NCL-207ENST00000461347 WDR74Q6RFH5 385 aaPredicted RBP12.56□□□□□ -0.4
NCL-207ENST00000461347 SHANK1Q9Y566 2161 aa12.56□□□□□ -0.4
NCL-207ENST00000461347 CNOT1A5YKK6 2376 aaKnown RBP12.55□□□□□ -0.4
NCL-207ENST00000461347 TIAF1O95411 115 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 TRGC2P03986 189 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 TGFBR3Q03167 851 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 IL24Q13007 206 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 ZNF343Q6P1L6 599 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 BTNL8Q6UX41 500 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 KCNE4Q8WWG9 221 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 THOC3Q96J01 351 aaKnown RBP12.55□□□□□ -0.4
NCL-207ENST00000461347 RAB40CQ96S21 281 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 SLC25A22Q9H936 323 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 GSN-AS1Q9NRJ2 163 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 B3GAT1Q9P2W7 334 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 ZNF391Q9UJN7 358 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 WDR87Q6ZQQ6 2873 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 A0A1B0GV90 55 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 RND3P61587 244 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 ARG2P78540 354 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 ZNF92Q03936 586 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 ZNF816Q0VGE8 651 aaPredicted RBP12.55□□□□□ -0.4
NCL-207ENST00000461347 HABP2Q14520 560 aaPredicted RBP12.55□□□□□ -0.4
NCL-207ENST00000461347 TMEM187Q14656 261 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 FAM27BQ5VT28 67 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 SPEM1Q8N4L4 309 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 CNEP1R1Q8N9A8 125 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 OR10P1Q8NGE3 313 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 OR51I2Q9H344 312 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 PLEKHA3Q9HB20 300 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 HEYLQ9NQ87 328 aaPredicted RBP12.55□□□□□ -0.4
NCL-207ENST00000461347 LIN7CQ9NUP9 197 aaKnown RBP12.55□□□□□ -0.4
NCL-207ENST00000461347 DOK5Q9P104 306 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 BCL3P20749 454 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 BMP5P22003 454 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 EDDM3AQ14507 147 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 ZNF574Q6ZN55 896 aaPredicted RBP12.55□□□□□ -0.4
NCL-207ENST00000461347 SLC25A45Q8N413 288 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 SMRP1Q8NCR6 262 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 ABHD3Q8WU67 409 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 RHOVQ96L33 236 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 RIMS4Q9H426 269 aaPredicted RBP12.55□□□□□ -0.4
NCL-207ENST00000461347 WNT16Q9UBV4 365 aa12.55□□□□□ -0.4
NCL-207ENST00000461347 MDFIC2A0A1B0GVS7 189 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 ACKR3P25106 362 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 UBE2G2P60604 165 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 ZXDAP98168 799 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 TMEM211Q6ICI0 200 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 ATP5SQ99766 215 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 MRPL13Q9BYD1 178 aaKnown RBP12.54□□□□□ -0.4
NCL-207ENST00000461347 OPA3Q9H6K4 179 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 BARX1Q9HBU1 254 aaPredicted RBP12.54□□□□□ -0.4
NCL-207ENST00000461347 LHX6Q9UPM6 363 aa12.54□□□□□ -0.4
NCL-207ENST00000461347 TRBV6-7A0A0A0MS04 114 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms