RNA–Protein interactions for RNA: ENST00000460514.1

ABCA4-202, Transcript of ATP binding cassette subfamily A member 4, humanhuman

TSL 5

Gene ABCA4, Length 690 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA4-202ENST00000460514 RAB27BO00194 218 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 HSPB6O14558 160 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 DVL1O14640 695 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 SOCS1O15524 211 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 ZNF737O75373 536 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 CD3GP09693 182 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 HIST1H1DP16402 221 aaKnown RBP6.31□□□□□ -1.4
ABCA4-202ENST00000460514 CDK2P24941 298 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 CHATP28329 748 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 ERP29P30040 261 aaKnown RBP6.31□□□□□ -1.4
ABCA4-202ENST00000460514 OR3A1P47881 315 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 EFNB2P52799 333 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 HOXA4Q00056 320 aaPredicted RBP6.31□□□□□ -1.4
ABCA4-202ENST00000460514 PAX5Q02548 391 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 ARFRP1Q13795 201 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 PNLIPRP3Q17RR3 467 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 SPANXN2Q5MJ10 180 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 WDR25Q64LD2 544 aaPredicted RBP6.31□□□□□ -1.4
ABCA4-202ENST00000460514 LYPD2Q6UXB3 125 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 C17orf107Q6ZR85 190 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 LINC00299Q6ZSB3 139 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 FAM216BQ8N7L0 139 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 ZNRF1Q8ND25 227 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 ST8SIA4Q92187 359 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 H1FXQ92522 213 aaKnown RBP6.31□□□□□ -1.4
ABCA4-202ENST00000460514 DIRAS2Q96HU8 199 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 ARHGAP5-AS1Q96IT6 56 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 DMRTB1Q96MA1 342 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 WDFY2Q96P53 400 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 PECRQ9BY49 303 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 PPA2Q9H2U2 334 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 NCOR1P1Q9H4R4 102 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP6.31□□□□□ -1.4
ABCA4-202ENST00000460514 ETAA1Q9NY74 926 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 EXTL2Q9UBQ6 330 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 MGAT4AQ9UM21 535 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 POLQO75417 2590 aa6.31□□□□□ -1.4
ABCA4-202ENST00000460514 TRAV18A0A075B6X5 111 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 LOC105371242A0A075B767 164 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 TRGV10A0A0A0MS01 117 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 A0A0A6YYD4 124 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 hCG_1809904A0A1W2PP81 198 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 A0A1W2PPE2 198 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 A0A1W2PR64 198 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 A0A1W2PRV1 198 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 hADV38S2A0JD32 116 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 TMEM82A0PJX8 343 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 FOXI3A8MTJ6 420 aaPredicted RBP6.3□□□□□ -1.4
ABCA4-202ENST00000460514 A8MXK9 166 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 B4DSR2 109 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 CTDSP2O14595 271 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 ENSAO43768 121 aaKnown RBP6.3□□□□□ -1.4
ABCA4-202ENST00000460514 PSPNO60542 156 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 EIF4EP06730 217 aaKnown RBP6.3□□□□□ -1.4
ABCA4-202ENST00000460514 LIPFP07098 398 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 ELK1P19419 428 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 AMY2BP19961 511 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 RBMXP38159 391 aaKnown RBP6.3□□□□□ -1.4
ABCA4-202ENST00000460514 GZMKP49863 264 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 P2RX3P56373 397 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 EDDM3BP56851 147 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 GNG2P59768 71 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 LMO4P61968 165 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 MRPS10P82664 201 aaKnown RBP6.3□□□□□ -1.4
ABCA4-202ENST00000460514 MEF2CQ06413 473 aaPredicted RBP6.3□□□□□ -1.4
ABCA4-202ENST00000460514 PLA2G7Q13093 441 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 EDDM3AQ14507 147 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 ATXN7L3Q14CW9 347 aaPredicted RBP6.3□□□□□ -1.4
ABCA4-202ENST00000460514 PDCD1Q15116 288 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 CDNFQ49AH0 187 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 KRBOX4Q5JUW0 171 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 SIGIRRQ6IA17 410 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 SLC35E4Q6ICL7 350 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 CNIH2Q6PI25 160 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 TRAT1Q6PIZ9 186 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 METAP1DQ6UB28 335 aaPredicted RBP6.3□□□□□ -1.4
ABCA4-202ENST00000460514 MOB1BQ7L9L4 216 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 C6orf201Q7Z4U5 140 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 LAX1Q8IWV1 398 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 ZNF565Q8N9K5 539 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 WFDC11Q8NEX6 87 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 OR4S1Q8NGB4 309 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 CMSS1Q9BQ75 279 aaKnown RBP6.3□□□□□ -1.4
ABCA4-202ENST00000460514 FAAP24Q9BTP7 215 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 CHST6Q9GZX3 395 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 SHARPINQ9H0F6 387 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 CHMP1AQ9HD42 196 aaPredicted RBP6.3□□□□□ -1.4
ABCA4-202ENST00000460514 C12orf4Q9NQ89 552 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 OR6C3Q9NZP0 311 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 CTSZQ9UBR2 303 aa6.3□□□□□ -1.4
ABCA4-202ENST00000460514 PRRC2AP48634 2157 aaKnown RBP6.3□□□□□ -1.4
ABCA4-202ENST00000460514 FLNBO75369 2602 aaKnown RBP6.29□□□□□ -1.4
ABCA4-202ENST00000460514 ASH1LQ9NR48 2969 aaKnown RBP6.29□□□□□ -1.4
ABCA4-202ENST00000460514 MEIKINA0A087WXM9 373 aa6.29□□□□□ -1.4
ABCA4-202ENST00000460514 TRAV20A0A0B4J274 112 aa6.29□□□□□ -1.4
ABCA4-202ENST00000460514 PPIAL4CA0A0B4J2A2 164 aa6.29□□□□□ -1.4
ABCA4-202ENST00000460514 A0A1W2PQ09 198 aa6.29□□□□□ -1.4
ABCA4-202ENST00000460514 ODAMA1E959 279 aa6.29□□□□□ -1.4
ABCA4-202ENST00000460514 UBE2QL1A1L167 161 aa6.29□□□□□ -1.4
ABCA4-202ENST00000460514 FABP12A6NFH5 140 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms