RNA–Protein interactions for RNA: ENST00000460483.5

SMNDC1-203, Transcript of survival motor neuron domain containing 1, humanhuman

TSL 3

Gene SMNDC1, Length 753 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMNDC1-203ENST00000460483 MOB1BQ7L9L4 216 aa9.16□□□□□ -0.94
SMNDC1-203ENST00000460483 TRAPPC6BQ86SZ2 158 aa9.16□□□□□ -0.94
SMNDC1-203ENST00000460483 KRTAP1-3Q8IUG1 177 aa9.16□□□□□ -0.94
SMNDC1-203ENST00000460483 FAM216BQ8N7L0 139 aa9.16□□□□□ -0.94
SMNDC1-203ENST00000460483 SEH1LQ96EE3 360 aa9.16□□□□□ -0.94
SMNDC1-203ENST00000460483 C1orf159Q96HA4 380 aa9.16□□□□□ -0.94
SMNDC1-203ENST00000460483 NKX3-1Q99801 234 aaPredicted RBP9.16□□□□□ -0.94
SMNDC1-203ENST00000460483 DCUN1D5Q9BTE7 237 aa9.16□□□□□ -0.94
SMNDC1-203ENST00000460483 CHMP1AQ9HD42 196 aaPredicted RBP9.16□□□□□ -0.94
SMNDC1-203ENST00000460483 C12orf4Q9NQ89 552 aa9.16□□□□□ -0.94
SMNDC1-203ENST00000460483 OPN4Q9UHM6 478 aa9.16□□□□□ -0.94
SMNDC1-203ENST00000460483 UBE2J1Q9Y385 318 aaPredicted RBP9.16□□□□□ -0.94
SMNDC1-203ENST00000460483 MEIKINA0A087WXM9 373 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 TRAV24A0A0B4J272 114 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 TGFAP01135 160 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 RBP4P02753 201 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 INHBBP09529 407 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 PPIAL4GP0DN37 164 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 HIST1H1DP16402 221 aaKnown RBP9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 HNF1AP20823 631 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 CHATP28329 748 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 CBX5P45973 191 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 GNG2P59768 71 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 MRPS10P82664 201 aaKnown RBP9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 ARFRP1Q13795 201 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 EDDM3AQ14507 147 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 METTL11BQ5VVY1 283 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 DCAF12L2Q5VW00 463 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 LYPD2Q6UXB3 125 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 C17orf107Q6ZR85 190 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 C1orf122Q6ZSJ8 110 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 TMEM186Q96B77 213 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 COX4I2Q96KJ9 171 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 CMSS1Q9BQ75 279 aaKnown RBP9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 DCTN5Q9BTE1 182 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 CHST6Q9GZX3 395 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 PPA2Q9H2U2 334 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 TAS2R3Q9NYW6 316 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 RPUSD1Q9UJJ7 312 aaKnown RBP9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 TRAPPC2LQ9UL33 140 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 KCNS2Q9ULS6 477 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 LINC00312Q9Y6C7 94 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 APCP25054 2843 aa9.15□□□□□ -0.94
SMNDC1-203ENST00000460483 HRNRQ86YZ3 2850 aaPredicted RBP9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 FLNBO75369 2602 aaKnown RBP9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 KIR2DS1A0A191URI9 304 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 TMEM82A0PJX8 343 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 ODAMA1E959 279 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 RAB27BO00194 218 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 HSPB6O14558 160 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 SPINT2O43291 252 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 PSPNO60542 156 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 KIR2DS4P43632 304 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 OR3A1P47881 315 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 CEBPDP49716 269 aaPredicted RBP9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 LCN2P80188 198 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 KIR2DS1Q14954 304 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 SPANXN2Q5MJ10 180 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 OR52W1Q6IF63 320 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 METAP1DQ6UB28 335 aaPredicted RBP9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 ZNF841Q6ZN19 808 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 BIVMQ86UB2 503 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 FAM185AQ8N0U4 392 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 KIR3DL3Q8N743 410 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 C8orf46Q8TAG6 207 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 DIRAS2Q96HU8 199 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 ZNF714Q96N38 554 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 SLIRPQ9GZT3 109 aaKnown RBP9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 SHARPINQ9H0F6 387 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 IL36RNQ9UBH0 155 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 CTSZQ9UBR2 303 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 KPTNQ9Y664 436 aa9.14□□□□□ -0.95
SMNDC1-203ENST00000460483 ARFGEF3Q5TH69 2177 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 LRBAP50851 2863 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 ABCA12Q86UK0 2595 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 TRAV18A0A075B6X5 111 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 A0A0B4J203 849 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 IGHV2-70DA0A0C4DH43 119 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 ZNF729A6NN14 1252 aaPredicted RBP9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 M0R1W7 72 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 SMAD7O15105 426 aaKnown RBP9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 SOCS1O15524 211 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 PHF1O43189 567 aaPredicted RBP9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 AMY2BP19961 511 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 DTYMKP23919 212 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 BPIFB3P59826 476 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 AESQ08117 197 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 ATXN7L3Q14CW9 347 aaPredicted RBP9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 PDCD1Q15116 288 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 SRSF7Q16629 238 aaKnown RBP eCLIP9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 CDNFQ49AH0 187 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 HACD4Q5VWC8 232 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 NCR3LG1Q68D85 454 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 ZNF497Q6ZNH5 498 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 C6orf201Q7Z4U5 140 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 BPIFB2Q8N4F0 458 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 OR4S1Q8NGB4 309 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 OR10A7Q8NGE5 316 aa9.13□□□□□ -0.95
SMNDC1-203ENST00000460483 OR5H6Q8NGV6 325 aa9.13□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms