RNA–Protein interactions for RNA: ENST00000458362.5

CRAT-207, Transcript of carnitine O-acetyltransferase, humanhuman

TSL 1 (best)

Gene CRAT, Length 2,253 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CRAT-207ENST00000458362 ZNF732B4DXR9 585 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 C3orf80F5H4A9 247 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 AKR1D1P51857 326 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 POLR2GP62487 172 aaKnown RBP eCLIP17.7■□□□□ 0.42
CRAT-207ENST00000458362 FAM185AQ8N0U4 392 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 GAPTQ8N292 157 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 LILRB1Q8NHL6 650 aaPredicted RBP17.7■□□□□ 0.42
CRAT-207ENST00000458362 POM121Q96HA1 1249 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 TMEM56Q96MV1 263 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 TMEM56-RWDD3S4R434 201 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 IGKV1-6A0A0C4DH72 117 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 GNMTQ14749 295 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 CEACAM21Q3KPI0 293 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 TMEM182Q6ZP80 229 aaPredicted RBP17.7■□□□□ 0.42
CRAT-207ENST00000458362 ZDHHC23Q8IYP9 409 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 SAXO1Q8IYX7 474 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 COMMD1Q8N668 190 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 SPRY4Q9C004 299 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 SMCO4Q9NRQ5 59 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 MUC3AQ02505 3323 aa17.7■□□□□ 0.42
CRAT-207ENST00000458362 SLC22A20A6NK97 555 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 SYNGR1O43759 233 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 CDS2O95674 445 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 PRH1P02810 166 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 HOXA1P49639 335 aaPredicted RBP17.69■□□□□ 0.42
CRAT-207ENST00000458362 C1orf210Q8IVY1 113 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 OR2C3Q8N628 320 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 MAGT1Q9H0U3 335 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 ZNF552Q9H707 407 aaPredicted RBP17.69■□□□□ 0.42
CRAT-207ENST00000458362 AHCTF1Q8WYP5 2266 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 COL6A3P12111 3177 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 A0A1B0GV50 99 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 C9orf172C9J069 976 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 TK1P04183 234 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 MAGEA5P43359 124 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 RND3P61587 244 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 SRPXP78539 464 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 CLINT1Q14677 625 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 CXorf66Q5JRM2 361 aaPredicted RBP17.69■□□□□ 0.42
CRAT-207ENST00000458362 DBX2Q6ZNG2 339 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 ZNF695Q8IW36 515 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 C14orf79Q96F83 325 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 EIF5A2Q9GZV4 153 aaKnown RBP17.69■□□□□ 0.42
CRAT-207ENST00000458362 SPACA1Q9HBV2 294 aa17.69■□□□□ 0.42
CRAT-207ENST00000458362 PCP4L1A6NKN8 68 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 LINC01387J3KSC0 135 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 ADAM20O43506 726 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 SS18L1O75177 396 aaPredicted RBP17.68■□□□□ 0.42
CRAT-207ENST00000458362 PPP1CCP36873 323 aaKnown RBP17.68■□□□□ 0.42
CRAT-207ENST00000458362 ZNF565Q8N9K5 539 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 APOBEC3DQ96AK3 386 aaPredicted RBP17.68■□□□□ 0.42
CRAT-207ENST00000458362 ZNF488Q96MN9 340 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 TAAR9Q96RI9 348 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 ZPBPQ9BS86 351 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 RPS10P5Q9NQ39 176 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 BIN3Q9NQY0 253 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 PLA2G3Q9NZ20 509 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 FOXJ2Q9P0K8 574 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 STRAPQ9Y3F4 350 aaKnown RBP17.68■□□□□ 0.42
CRAT-207ENST00000458362 K7N7A8 449 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 HSD17B6O14756 317 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 TUSC2O75896 110 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 NKX2-1P43699 371 aaPredicted RBP17.68■□□□□ 0.42
CRAT-207ENST00000458362 SRSF7Q16629 238 aaKnown RBP eCLIP17.68■□□□□ 0.42
CRAT-207ENST00000458362 AWAT1Q58HT5 328 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 CCL28Q9NRJ3 127 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 ZNF407Q9C0G0 2248 aa17.68■□□□□ 0.42
CRAT-207ENST00000458362 SSSCA1O60232 199 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 LILRA1O75019 489 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 SYNGR4O95473 234 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 OMGP23515 440 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 HMGN3Q15651 99 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 C3AR1Q16581 482 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 FAM213BQ8TBF2 198 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 NEK7Q8TDX7 302 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 RNF122Q9H9V4 155 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 A0A1W2PNU3 283 aaPredicted RBP17.67■□□□□ 0.42
CRAT-207ENST00000458362 ZNF724A8MTY0 619 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 TRAPPC2LH3BP13 241 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 COX5BP10606 129 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 RAB5CP51148 216 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 ABHD17BQ5VST6 288 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 ODF3L1Q8IXM7 274 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 POM121L2Q96KW2 1035 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 ABHD14AQ9BUJ0 271 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 TTTY12Q9BZ98 90 aa17.67■□□□□ 0.42
CRAT-207ENST00000458362 SNRNP70P08621 437 aaKnown RBP17.66■□□□□ 0.42
CRAT-207ENST00000458362 RAB1AP62820 205 aa17.66■□□□□ 0.42
CRAT-207ENST00000458362 HABP2Q14520 560 aaPredicted RBP17.66■□□□□ 0.42
CRAT-207ENST00000458362 OR1C1Q15619 314 aa17.66■□□□□ 0.42
CRAT-207ENST00000458362 SHEQ5VZ18 495 aa17.66■□□□□ 0.42
CRAT-207ENST00000458362 C20orf204Q6ZNR8 217 aa17.66■□□□□ 0.42
CRAT-207ENST00000458362 PLPPR1Q8TBJ4 325 aa17.66■□□□□ 0.42
CRAT-207ENST00000458362 TMEM171Q8WVE6 324 aa17.66■□□□□ 0.42
CRAT-207ENST00000458362 GUCD1Q96NT3 240 aa17.66■□□□□ 0.42
CRAT-207ENST00000458362 IP6K3Q96PC2 410 aa17.66■□□□□ 0.42
CRAT-207ENST00000458362 C20orf24Q9BUV8 137 aa17.66■□□□□ 0.42
CRAT-207ENST00000458362 GLRX2Q9NS18 164 aa17.66■□□□□ 0.42
CRAT-207ENST00000458362 B4GALT7Q9UBV7 327 aa17.66■□□□□ 0.42
CRAT-207ENST00000458362 FBXO7Q9Y3I1 522 aa17.66■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 53.6 ms