RNA–Protein interactions for RNA: ENST00000458038.5

CPNE1-220, Transcript of copine 1, humanhuman

TSL 3

Gene CPNE1, Length 596 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-220ENST00000458038 CGB3P0DN86 165 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 CGB7P0DN87 165 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 TMEM225BP0DP42 221 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 NFYBP25208 207 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 MTNR1BP49286 362 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 C10orf99Q6UWK7 81 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 SLC16A12Q6ZSM3 486 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 MRPL41Q8IXM3 137 aaKnown RBP17.08■□□□□ 0.32
CPNE1-220ENST00000458038 ACBD7Q8N6N7 88 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 HAVCR2Q8TDQ0 301 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 CPNE2Q96FN4 548 aaPredicted RBP17.08■□□□□ 0.32
CPNE1-220ENST00000458038 KIRREL1Q96J84 757 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 SPACA5Q96QH8 159 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 BARHL1Q9BZE3 327 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 LINC00574Q9H8X3 128 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 OAZ3Q9UMX2 235 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 MYRFQ9Y2G1 1151 aa17.08■□□□□ 0.32
CPNE1-220ENST00000458038 OR4C45A6NMZ5 311 aa17.07■□□□□ 0.32
CPNE1-220ENST00000458038 J3QR06 171 aa17.07■□□□□ 0.32
CPNE1-220ENST00000458038 FGF16O43320 207 aa17.07■□□□□ 0.32
CPNE1-220ENST00000458038 THBS3P49746 956 aa17.07■□□□□ 0.32
CPNE1-220ENST00000458038 RAB7AP51149 207 aa17.07■□□□□ 0.32
CPNE1-220ENST00000458038 RPL23AP62750 156 aaKnown RBP17.07■□□□□ 0.32
CPNE1-220ENST00000458038 CD69Q07108 199 aa17.07■□□□□ 0.32
CPNE1-220ENST00000458038 MADCAM1Q13477 382 aa17.07■□□□□ 0.32
CPNE1-220ENST00000458038 CDK5R1Q15078 307 aa17.07■□□□□ 0.32
CPNE1-220ENST00000458038 KISS1Q15726 138 aa17.07■□□□□ 0.32
CPNE1-220ENST00000458038 ELP2Q6IA86 826 aa17.07■□□□□ 0.32
CPNE1-220ENST00000458038 UNQ9370/PRO34162Q6UXP9 181 aa17.07■□□□□ 0.32
CPNE1-220ENST00000458038 SERPINA12Q8IW75 414 aa17.07■□□□□ 0.32
CPNE1-220ENST00000458038 OR8H3Q8N146 312 aa17.07■□□□□ 0.32
CPNE1-220ENST00000458038 OR5D18Q8NGL1 313 aa17.07■□□□□ 0.32
CPNE1-220ENST00000458038 B9D2Q9BPU9 175 aa17.07■□□□□ 0.32
CPNE1-220ENST00000458038 SH2D7A6NKC9 451 aaPredicted RBP17.06■□□□□ 0.32
CPNE1-220ENST00000458038 KCNJ3P48549 501 aa17.06■□□□□ 0.32
CPNE1-220ENST00000458038 SNRPGP62308 76 aaKnown RBP17.06■□□□□ 0.32
CPNE1-220ENST00000458038 PAX5Q02548 391 aa17.06■□□□□ 0.32
CPNE1-220ENST00000458038 ALKBH1Q13686 389 aaKnown RBP17.06■□□□□ 0.32
CPNE1-220ENST00000458038 ATXN7L3Q14CW9 347 aaPredicted RBP17.06■□□□□ 0.32
CPNE1-220ENST00000458038 C1orf146Q5VVC0 180 aa17.06■□□□□ 0.32
CPNE1-220ENST00000458038 OR10A7Q8NGE5 316 aa17.06■□□□□ 0.32
CPNE1-220ENST00000458038 OR51A4Q8NGJ6 313 aa17.06■□□□□ 0.32
CPNE1-220ENST00000458038 RNFT2Q96EX2 444 aa17.06■□□□□ 0.32
CPNE1-220ENST00000458038 PELI1Q96FA3 418 aa17.06■□□□□ 0.32
CPNE1-220ENST00000458038 ZNF649Q9BS31 505 aa17.06■□□□□ 0.32
CPNE1-220ENST00000458038 ING3Q9NXR8 418 aa17.06■□□□□ 0.32
CPNE1-220ENST00000458038 CALYQ9NYX4 217 aa17.06■□□□□ 0.32
CPNE1-220ENST00000458038 J3QLW9 94 aa17.05■□□□□ 0.32
CPNE1-220ENST00000458038 SULT1B1O43704 296 aa17.05■□□□□ 0.32
CPNE1-220ENST00000458038 SNRNP70P08621 437 aaKnown RBP17.05■□□□□ 0.32
CPNE1-220ENST00000458038 HCKP08631 526 aa17.05■□□□□ 0.32
CPNE1-220ENST00000458038 ZNF19P17023 458 aa17.05■□□□□ 0.32
CPNE1-220ENST00000458038 HOXD3P31249 432 aaPredicted RBP17.05■□□□□ 0.32
CPNE1-220ENST00000458038 MYCNOSP40205 109 aa17.05■□□□□ 0.32
CPNE1-220ENST00000458038 GLP1RP43220 463 aa17.05■□□□□ 0.32
CPNE1-220ENST00000458038 GP2P55259 537 aaKnown RBP17.05■□□□□ 0.32
CPNE1-220ENST00000458038 ZP1P60852 638 aa17.05■□□□□ 0.32
CPNE1-220ENST00000458038 SLC35B1P78383 322 aa17.05■□□□□ 0.32
CPNE1-220ENST00000458038 ETV3LQ6ZN32 361 aa17.05■□□□□ 0.32
CPNE1-220ENST00000458038 PARP16Q8N5Y8 322 aa17.05■□□□□ 0.32
CPNE1-220ENST00000458038 C5orf56Q8N8D9 126 aa17.05■□□□□ 0.32
CPNE1-220ENST00000458038 PXT1Q8NFP0 134 aa17.05■□□□□ 0.32
CPNE1-220ENST00000458038 OR10AC1Q8NH08 325 aa17.05■□□□□ 0.32
CPNE1-220ENST00000458038 PPIL3Q9H2H8 161 aaKnown RBP17.05■□□□□ 0.32
CPNE1-220ENST00000458038 IDI2-AS1Q9NZ38 188 aa17.05■□□□□ 0.32
CPNE1-220ENST00000458038 ORC6Q9Y5N6 252 aa17.05■□□□□ 0.32
CPNE1-220ENST00000458038 MEIKINA0A087WXM9 373 aa17.04■□□□□ 0.32
CPNE1-220ENST00000458038 H0YJX3 145 aa17.04■□□□□ 0.32
CPNE1-220ENST00000458038 IL1AP01583 271 aa17.04■□□□□ 0.32
CPNE1-220ENST00000458038 TMEM11P17152 192 aa17.04■□□□□ 0.32
CPNE1-220ENST00000458038 MRPL28Q13084 256 aaKnown RBP17.04■□□□□ 0.32
CPNE1-220ENST00000458038 HES1Q14469 280 aa17.04■□□□□ 0.32
CPNE1-220ENST00000458038 PAN3Q58A45 887 aaKnown RBP17.04■□□□□ 0.32
CPNE1-220ENST00000458038 C11orf87Q6NUJ2 197 aa17.04■□□□□ 0.32
CPNE1-220ENST00000458038 OR2W3Q7Z3T1 314 aa17.04■□□□□ 0.32
CPNE1-220ENST00000458038 RNF144BQ7Z419 303 aa17.04■□□□□ 0.32
CPNE1-220ENST00000458038 ZNF329Q86UD4 541 aa17.04■□□□□ 0.32
CPNE1-220ENST00000458038 OR56B4Q8NH76 319 aa17.04■□□□□ 0.32
CPNE1-220ENST00000458038 CNIH3Q8TBE1 160 aa17.04■□□□□ 0.32
CPNE1-220ENST00000458038 C4orf36Q96KX1 117 aa17.04■□□□□ 0.32
CPNE1-220ENST00000458038 WWC2-AS2Q96NR7 200 aa17.04■□□□□ 0.32
CPNE1-220ENST00000458038 KIF25Q9UIL4 384 aa17.04■□□□□ 0.32
CPNE1-220ENST00000458038 PSG11Q9UQ72 335 aa17.04■□□□□ 0.32
CPNE1-220ENST00000458038 EXOGQ9Y2C4 368 aaKnown RBP17.04■□□□□ 0.32
CPNE1-220ENST00000458038 A0A1W2PPI3 338 aa17.03■□□□□ 0.32
CPNE1-220ENST00000458038 TMEM212A6NML5 194 aa17.03■□□□□ 0.32
CPNE1-220ENST00000458038 SERPINE3A8MV23 424 aa17.03■□□□□ 0.32
CPNE1-220ENST00000458038 NPIPB11E5RHQ5 1161 aa17.03■□□□□ 0.32
CPNE1-220ENST00000458038 ATP5HO75947 161 aa17.03■□□□□ 0.32
CPNE1-220ENST00000458038 GALEQ14376 348 aa17.03■□□□□ 0.32
CPNE1-220ENST00000458038 IL13RA2Q14627 380 aa17.03■□□□□ 0.32
CPNE1-220ENST00000458038 ZNF691Q5VV52 312 aa17.03■□□□□ 0.32
CPNE1-220ENST00000458038 FOXRED2Q8IWF2 684 aa17.03■□□□□ 0.32
CPNE1-220ENST00000458038 SYS1Q8N2H4 156 aa17.03■□□□□ 0.32
CPNE1-220ENST00000458038 DRAM1Q8N682 238 aa17.03■□□□□ 0.32
CPNE1-220ENST00000458038 NUDT19A8MXV4 375 aa17.02■□□□□ 0.32
CPNE1-220ENST00000458038 MAGEB3O15480 346 aa17.02■□□□□ 0.32
CPNE1-220ENST00000458038 IGHG2P01859 326 aa17.02■□□□□ 0.32
CPNE1-220ENST00000458038 OR13A1Q8NGR1 328 aa17.02■□□□□ 0.32
CPNE1-220ENST00000458038 NR1H4Q96RI1 486 aaPredicted RBP17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms