RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 CTSZQ9UBR2 303 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 IL19Q9UHD0 177 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 VSIG4Q9Y279 399 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 POLDIP2Q9Y2S7 368 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 WIPI2Q9Y4P8 454 aa7.29□□□□□ -1.24
RIF1-208ENST00000457745 SERPINE3A8MV23 424 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 ZNF736B4DX44 427 aaPredicted RBP7.28□□□□□ -1.24
RIF1-208ENST00000457745 B9A039 149 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 ARPC1BO15143 372 aaKnown RBP7.28□□□□□ -1.24
RIF1-208ENST00000457745 RAB3DO95716 219 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 CYB5AP00167 134 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 KNG1P01042 644 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 TCRBP04435 133 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 AMY2AP04746 511 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 CSF1P09603 554 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 AKAIN1P0CW23 69 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 ANXA7P20073 488 aaKnown RBP7.28□□□□□ -1.24
RIF1-208ENST00000457745 LMO1P25800 156 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 GLIPR1P48060 266 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 INPP1P49441 399 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 DEFA1P59665 94 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 DEFA3P59666 94 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 KRTAP10-9P60411 292 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 PAN3Q58A45 887 aaKnown RBP7.28□□□□□ -1.24
RIF1-208ENST00000457745 IGSF11Q5DX21 431 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 ZNF660Q6AZW8 331 aaPredicted RBP7.28□□□□□ -1.24
RIF1-208ENST00000457745 DTX2Q86UW9 622 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 GAPTQ8N292 157 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 ZNRF1Q8ND25 227 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 ENKURQ8TC29 256 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 WDR89Q96FK6 387 aaPredicted RBP7.28□□□□□ -1.24
RIF1-208ENST00000457745 LRRC46Q96FV0 321 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 CCL13Q99616 98 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 SEC22CQ9BRL7 303 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 CACNG6Q9BXT2 260 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 TMPRSS13Q9BYE2 586 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 FXYD6Q9H0Q3 95 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 TMEM165Q9HC07 324 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 Q9N2K0 584 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 IFT46Q9NQC8 304 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 NUDT15Q9NV35 164 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 MCUBQ9NWR8 336 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 RNF7Q9UBF6 113 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 RABL2AQ9UBK7 228 aaPredicted RBP7.28□□□□□ -1.24
RIF1-208ENST00000457745 ZDHHC8Q9ULC8 765 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 RABL2BQ9UNT1 228 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 ALG5Q9Y673 324 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 DCHS2Q6V1P9 2916 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 MYO18BQ8IUG5 2567 aa7.28□□□□□ -1.24
RIF1-208ENST00000457745 UTP20O75691 2785 aaKnown RBP7.27□□□□□ -1.25
RIF1-208ENST00000457745 FAM240BA0A1B0GVZ2 78 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 FUOMA2VDF0 154 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 OR5H14A6NHG9 310 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 A8MV72 311 aaPredicted RBP7.27□□□□□ -1.25
RIF1-208ENST00000457745 TMEM178BH3BS89 294 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 SCGNO76038 276 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 NDUFB6O95139 128 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 PRDX2P32119 198 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 TAS2R19P59542 299 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 SSBP1Q04837 148 aaKnown RBP7.27□□□□□ -1.25
RIF1-208ENST00000457745 AESQ08117 197 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 ZMYND11Q15326 602 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 SPIN3Q5JUX0 258 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 AVPI1Q5T686 147 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 ATPAF1Q5TC12 328 aaPredicted RBP7.27□□□□□ -1.25
RIF1-208ENST00000457745 AADACL3Q5VUY0 350 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 TEX36Q5VZQ5 186 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 ZNF497Q6ZNH5 498 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 SLC36A1Q7Z2H8 476 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 LHFPL1Q86WI0 220 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 OR52B4Q8NGK2 314 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 OR13A1Q8NGR1 328 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 OR1L1Q8NH94 360 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 CHAC2Q8WUX2 184 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 CAPSLQ8WWF8 208 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 TMEM230Q96A57 120 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 RBMXL1Q96E39 390 aaKnown RBP7.27□□□□□ -1.25
RIF1-208ENST00000457745 VRK1Q99986 396 aaPredicted RBP7.27□□□□□ -1.25
RIF1-208ENST00000457745 MARVELD1Q9BSK0 173 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 C20orf85Q9H1P6 137 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 PLEKHF2Q9H8W4 249 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 SAP30LQ9HAJ7 183 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 C12orf4Q9NQ89 552 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 CBLN4Q9NTU7 201 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 TMEM106BQ9NUM4 274 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 ETAA1Q9NY74 926 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 PRR13Q9NZ81 148 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 OR1A1Q9P1Q5 309 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 KIF25Q9UIL4 384 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 PPP1R3CQ9UQK1 317 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 LAMP3Q9UQV4 416 aa7.27□□□□□ -1.25
RIF1-208ENST00000457745 TRBV6-6A0A0A6YYG2 114 aa7.26□□□□□ -1.25
RIF1-208ENST00000457745 IGKV1D-13A0A0B4J2D9 117 aa7.26□□□□□ -1.25
RIF1-208ENST00000457745 INMT-MINDY4F8WBC2 141 aa7.26□□□□□ -1.25
RIF1-208ENST00000457745 LGALS8O00214 317 aa7.26□□□□□ -1.25
RIF1-208ENST00000457745 TPD52L2O43399 206 aaKnown RBP7.26□□□□□ -1.25
RIF1-208ENST00000457745 IGKV1-13P0DP09 117 aa7.26□□□□□ -1.25
RIF1-208ENST00000457745 PI3P19957 117 aa7.26□□□□□ -1.25
RIF1-208ENST00000457745 DTYMKP23919 212 aa7.26□□□□□ -1.25
RIF1-208ENST00000457745 GABRA2P47869 451 aa7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms