RNA–Protein interactions for RNA: ENST00000457179.5

TOP3B-213, Transcript of DNA topoisomerase III beta, humanhuman

TSL 5

Gene TOP3B, Length 3,061 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TOP3B-213ENST00000457179 TUBG1P23258 451 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 PTGER4P35408 488 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 CEACAM6P40199 344 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 RPL29P47914 159 aaKnown RBP11.79□□□□□ -0.52
TOP3B-213ENST00000457179 PPA1Q15181 289 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 EXT1Q16394 746 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 SP6Q3SY56 376 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 NCR3LG1Q68D85 454 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 PEG10Q86TG7 708 aaKnown RBP11.79□□□□□ -0.52
TOP3B-213ENST00000457179 TVP23CQ96ET8 276 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 WFIKKN1Q96NZ8 548 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 ALKBH3Q96Q83 286 aaPredicted RBP11.79□□□□□ -0.52
TOP3B-213ENST00000457179 GPER1Q99527 375 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 WDR54Q9H977 334 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 LRFN1Q9P244 771 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 CHD8Q9HCK8 2581 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 SPAARA0A1B0GVQ0 90 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 IFNA21P01568 189 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 ZNF20P17024 532 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 TBPP20226 339 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 UCP2P55851 309 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 BATFQ16520 125 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 DMRTA1Q5VZB9 504 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 FAM57BQ71RH2 274 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 SGPP2Q8IWX5 399 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 SLC35G3Q8N808 338 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 BEND2Q8NDZ0 799 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 C1orf123Q9NWV4 160 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 ZNF319Q9P2F9 582 aa11.79□□□□□ -0.52
TOP3B-213ENST00000457179 C14orf166Q9Y224 244 aaKnown RBP11.79□□□□□ -0.52
TOP3B-213ENST00000457179 CCDC187A0A096LP49 1063 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 DLEU1O43261 78 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 SRSF10O75494 262 aaKnown RBP11.78□□□□□ -0.52
TOP3B-213ENST00000457179 RAD51DO75771 328 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 CD59P13987 128 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 GLIPR1P48060 266 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 PLAC9Q5JTB6 97 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 ZNF283Q8N7M2 679 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 IFNL4K9M1U5 179 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 DVL1O14640 695 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 CXCL13O43927 109 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 DFFBO76075 338 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 SPINK2P20155 84 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 P2RY1P47900 373 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 CYB561P49447 251 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 C3AR1Q16581 482 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 CLEC12BQ2HXU8 276 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 C1orf100Q5SVJ3 147 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 RNF133Q8WVZ7 376 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 HAS2Q92819 552 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 SCGB3A2Q96PL1 93 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 ELL3Q9HB65 397 aaPredicted RBP11.78□□□□□ -0.52
TOP3B-213ENST00000457179 GPR84Q9NQS5 396 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 FAM206AQ9NX38 181 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 PITPNC1Q9UKF7 332 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 STRAPQ9Y3F4 350 aaKnown RBP11.78□□□□□ -0.52
TOP3B-213ENST00000457179 LHFPL6Q9Y693 200 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 WSB1Q9Y6I7 421 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 CHD3Q12873 2000 aaKnown RBP11.78□□□□□ -0.52
TOP3B-213ENST00000457179 A0A0A6YYD4 124 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 A0A0J9YW62 118 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 HSPB2A8KAH6 182 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 ZNF205O95201 554 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 CELA3AP09093 270 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 FSTP19883 344 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 OMGP23515 440 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 TRA2AQ13595 282 aaKnown RBP eCLIP11.78□□□□□ -0.52
TOP3B-213ENST00000457179 HSPB2Q16082 182 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 LFNGQ8NES3 379 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 OR2G3Q8NGZ4 309 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 OIT3Q8WWZ8 545 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 ZNF845Q96IR2 970 aaPredicted RBP11.78□□□□□ -0.52
TOP3B-213ENST00000457179 ARHGAP5-AS1Q96IT6 56 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 GAB2Q9UQC2 676 aa11.78□□□□□ -0.52
TOP3B-213ENST00000457179 SPTAN1Q13813 2472 aaKnown RBP11.77□□□□□ -0.52
TOP3B-213ENST00000457179 ADGRG4Q8IZF6 3080 aa11.77□□□□□ -0.52
TOP3B-213ENST00000457179 MT-CO3P00414 261 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 IGHMP01871 453 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 MBPP02686 304 aaPredicted RBP11.77□□□□□ -0.53
TOP3B-213ENST00000457179 SRP19P09132 144 aaKnown RBP11.77□□□□□ -0.53
TOP3B-213ENST00000457179 RPS2P15880 293 aaKnown RBP11.77□□□□□ -0.53
TOP3B-213ENST00000457179 ZNF93P35789 620 aaPredicted RBP11.77□□□□□ -0.53
TOP3B-213ENST00000457179 ALDH3B1P43353 468 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 OR3A4PP47883 348 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 TDGF1P3P51864 188 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 ZNF121P58317 390 aaPredicted RBP11.77□□□□□ -0.53
TOP3B-213ENST00000457179 ZNF705AQ6ZN79 300 aaPredicted RBP11.77□□□□□ -0.53
TOP3B-213ENST00000457179 TMPRSS7Q7RTY8 843 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 VASH2Q86V25 355 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 DEFB124Q8NES8 71 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 OR13D1Q8NGV5 346 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 LIN37Q96GY3 246 aaPredicted RBP11.77□□□□□ -0.53
TOP3B-213ENST00000457179 DEPPQ9NTK1 212 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 AK3Q9UIJ7 227 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 NCOR2Q9Y618 2525 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 FAM221AA4D161 298 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 ZIC3O60481 467 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 DBHP09172 617 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 MMP9P14780 707 aa11.77□□□□□ -0.53
TOP3B-213ENST00000457179 CCNOP22674 350 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms