RNA–Protein interactions for RNA: ENST00000455596.5

HMGB3-205, Transcript of high mobility group box 3, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene HMGB3, Length 793 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3-205ENST00000455596 BAIAP2L2Q6UXY1 529 aa17.12■□□□□ 0.33
HMGB3-205ENST00000455596 AHSA2Q719I0 299 aa17.12■□□□□ 0.33
HMGB3-205ENST00000455596 ZNF596Q8TC21 504 aa17.12■□□□□ 0.33
HMGB3-205ENST00000455596 ORAI1Q96D31 301 aa17.12■□□□□ 0.33
HMGB3-205ENST00000455596 PGLYRP3Q96LB9 341 aa17.12■□□□□ 0.33
HMGB3-205ENST00000455596 PPIL3Q9H2H8 161 aaKnown RBP17.12■□□□□ 0.33
HMGB3-205ENST00000455596 IL36GQ9NZH8 169 aa17.12■□□□□ 0.33
HMGB3-205ENST00000455596 CKLFQ9UBR5 152 aa17.12■□□□□ 0.33
HMGB3-205ENST00000455596 SIGLEC9Q9Y336 463 aa17.12■□□□□ 0.33
HMGB3-205ENST00000455596 TRAV24A0A0B4J272 114 aa17.11■□□□□ 0.33
HMGB3-205ENST00000455596 A6NDX4 124 aa17.11■□□□□ 0.33
HMGB3-205ENST00000455596 F2RL2O00254 374 aa17.11■□□□□ 0.33
HMGB3-205ENST00000455596 MYL12BO14950 172 aa17.11■□□□□ 0.33
HMGB3-205ENST00000455596 CDRT1O95170 752 aa17.11■□□□□ 0.33
HMGB3-205ENST00000455596 CSTBP04080 98 aaKnown RBP17.11■□□□□ 0.33
HMGB3-205ENST00000455596 CD34P28906 385 aa17.11■□□□□ 0.33
HMGB3-205ENST00000455596 RPS11P62280 158 aaKnown RBP eCLIP17.11■□□□□ 0.33
HMGB3-205ENST00000455596 SLC34A1Q06495 639 aa17.11■□□□□ 0.33
HMGB3-205ENST00000455596 CCBE1Q6UXH8 406 aaPredicted RBP17.11■□□□□ 0.33
HMGB3-205ENST00000455596 BPIFB6Q8NFQ5 453 aa17.11■□□□□ 0.33
HMGB3-205ENST00000455596 OR4P4Q8NGL7 312 aa17.11■□□□□ 0.33
HMGB3-205ENST00000455596 BARHL1Q9BZE3 327 aa17.11■□□□□ 0.33
HMGB3-205ENST00000455596 PAK1IP1Q9NWT1 392 aaPredicted RBP17.11■□□□□ 0.33
HMGB3-205ENST00000455596 PNMA8CA0A1B0GUJ8 204 aa17.1■□□□□ 0.33
HMGB3-205ENST00000455596 MEGF11A6BM72 1044 aa17.1■□□□□ 0.33
HMGB3-205ENST00000455596 FAM172BPA6NC97 362 aa17.1■□□□□ 0.33
HMGB3-205ENST00000455596 GPX5O75715 221 aa17.1■□□□□ 0.33
HMGB3-205ENST00000455596 GDNFP39905 211 aa17.1■□□□□ 0.33
HMGB3-205ENST00000455596 KCNJ3P48549 501 aa17.1■□□□□ 0.33
HMGB3-205ENST00000455596 WNT4P56705 351 aa17.1■□□□□ 0.33
HMGB3-205ENST00000455596 C17orf58Q2M2W7 97 aa17.1■□□□□ 0.33
HMGB3-205ENST00000455596 TMEM219Q86XT9 240 aa17.1■□□□□ 0.33
HMGB3-205ENST00000455596 OSR2Q8N2R0 312 aa17.1■□□□□ 0.33
HMGB3-205ENST00000455596 ZNF565Q8N9K5 539 aa17.1■□□□□ 0.33
HMGB3-205ENST00000455596 ZNF184Q99676 751 aaPredicted RBP17.1■□□□□ 0.33
HMGB3-205ENST00000455596 NCOR1P1Q9H4R4 102 aa17.1■□□□□ 0.33
HMGB3-205ENST00000455596 DPM3Q9P2X0 92 aa17.1■□□□□ 0.33
HMGB3-205ENST00000455596 ST3GAL6Q9Y274 331 aa17.1■□□□□ 0.33
HMGB3-205ENST00000455596 MEIKINA0A087WXM9 373 aa17.09■□□□□ 0.33
HMGB3-205ENST00000455596 JUNBP17275 347 aaPredicted RBP17.09■□□□□ 0.33
HMGB3-205ENST00000455596 FSTP19883 344 aa17.09■□□□□ 0.33
HMGB3-205ENST00000455596 SERPINA2P20848 420 aa17.09■□□□□ 0.33
HMGB3-205ENST00000455596 C21orf33P30042 268 aaPredicted RBP17.09■□□□□ 0.33
HMGB3-205ENST00000455596 GLP1RP43220 463 aa17.09■□□□□ 0.33
HMGB3-205ENST00000455596 RBM11P57052 281 aaKnown RBP17.09■□□□□ 0.33
HMGB3-205ENST00000455596 BDH1Q02338 343 aa17.09■□□□□ 0.33
HMGB3-205ENST00000455596 HERPUD1Q15011 391 aa17.09■□□□□ 0.33
HMGB3-205ENST00000455596 NHLRC3Q5JS37 347 aa17.09■□□□□ 0.33
HMGB3-205ENST00000455596 Q6ZTK2 550 aa17.09■□□□□ 0.33
HMGB3-205ENST00000455596 TFAP2CQ92754 450 aa17.09■□□□□ 0.33
HMGB3-205ENST00000455596 OR14A2Q96R54 314 aa17.09■□□□□ 0.33
HMGB3-205ENST00000455596 MMP27Q9H306 513 aa17.09■□□□□ 0.33
HMGB3-205ENST00000455596 ZNF286AQ9HBT8 521 aa17.09■□□□□ 0.33
HMGB3-205ENST00000455596 PCDHB16Q9NRJ7 776 aa17.09■□□□□ 0.33
HMGB3-205ENST00000455596 KIF25Q9UIL4 384 aa17.09■□□□□ 0.33
HMGB3-205ENST00000455596 A0A087X0M5 115 aa17.08■□□□□ 0.32
HMGB3-205ENST00000455596 KBTBD11-OT1A0A1B0GTJ5 212 aa17.08■□□□□ 0.32
HMGB3-205ENST00000455596 A0A1B0GX30 115 aa17.08■□□□□ 0.32
HMGB3-205ENST00000455596 H3BUI4 141 aa17.08■□□□□ 0.32
HMGB3-205ENST00000455596 TOR1AO14656 332 aa17.08■□□□□ 0.32
HMGB3-205ENST00000455596 ZNF780AO75290 641 aaPredicted RBP17.08■□□□□ 0.32
HMGB3-205ENST00000455596 IGLV1-47P01700 117 aa17.08■□□□□ 0.32
HMGB3-205ENST00000455596 PRRX1P54821 245 aa17.08■□□□□ 0.32
HMGB3-205ENST00000455596 PAX5Q02548 391 aa17.08■□□□□ 0.32
HMGB3-205ENST00000455596 RSBN1Q5VWQ0 802 aaPredicted RBP17.08■□□□□ 0.32
HMGB3-205ENST00000455596 LINC00596Q86U02 117 aa17.08■□□□□ 0.32
HMGB3-205ENST00000455596 CREB3L1Q96BA8 519 aa17.08■□□□□ 0.32
HMGB3-205ENST00000455596 IFT22Q9H7X7 185 aa17.08■□□□□ 0.32
HMGB3-205ENST00000455596 ZNF702PQ9H963 129 aa17.08■□□□□ 0.32
HMGB3-205ENST00000455596 FKBP14Q9NWM8 211 aa17.08■□□□□ 0.32
HMGB3-205ENST00000455596 TRAV8-7A0A075B6U6 113 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 TRBV5-7A0A0A0MS05 114 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 LEUTXA8MZ59 168 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 OR7C1O76099 320 aaPredicted RBP17.07■□□□□ 0.32
HMGB3-205ENST00000455596 CD1AP06126 327 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 CGB3P0DN86 165 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 CGB7P0DN87 165 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 CELP19835 753 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 NFYBP25208 207 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 CEACAM3P40198 252 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 ARHGDIBP52566 201 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 GPR176Q14439 515 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 HLA-DRB5Q30154 266 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 KLHDC1Q8N7A1 406 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 NANOGP1Q8N7R0 232 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 SUMF2Q8NBJ7 301 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 OR13A1Q8NGR1 328 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 PLPPR1Q8TBJ4 325 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 KIRREL1Q96J84 757 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 DPCDQ9BVM2 203 aaPredicted RBP17.07■□□□□ 0.32
HMGB3-205ENST00000455596 PRSS22Q9GZN4 317 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 CALYQ9NYX4 217 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 NKX1-2Q9UD57 310 aaPredicted RBP17.07■□□□□ 0.32
HMGB3-205ENST00000455596 FOXJ3Q9UPW0 622 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 ERGIC3Q9Y282 383 aa17.07■□□□□ 0.32
HMGB3-205ENST00000455596 A0A1W2PPK0 400 aa17.06■□□□□ 0.32
HMGB3-205ENST00000455596 MAGEA13PA6NCF6 341 aa17.06■□□□□ 0.32
HMGB3-205ENST00000455596 BRS3P32247 399 aa17.06■□□□□ 0.32
HMGB3-205ENST00000455596 C2orf68Q2NKX9 166 aa17.06■□□□□ 0.32
HMGB3-205ENST00000455596 MPV17LQ2QL34 196 aa17.06■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms