RNA–Protein interactions for RNA: ENST00000454583.6

RIF1-207, Transcript of replication timing regulatory factor 1, humanhuman

TSL 2

Gene RIF1, Length 3,552 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-207ENST00000454583 HMGN3Q15651 99 aa4.11□□□□□ -1.75
RIF1-207ENST00000454583 TBC1D28Q2M2D7 210 aa4.11□□□□□ -1.75
RIF1-207ENST00000454583 C17orf58Q2M2W7 97 aa4.11□□□□□ -1.75
RIF1-207ENST00000454583 PLET1Q6UQ28 207 aa4.11□□□□□ -1.75
RIF1-207ENST00000454583 LHFPL2Q6ZUX7 228 aa4.11□□□□□ -1.75
RIF1-207ENST00000454583 C8orf31Q8N9H6 132 aa4.11□□□□□ -1.75
RIF1-207ENST00000454583 GALNT14Q96FL9 552 aa4.11□□□□□ -1.75
RIF1-207ENST00000454583 NMES1Q9C002 83 aa4.11□□□□□ -1.75
RIF1-207ENST00000454583 DNTTIP1Q9H147 329 aa4.11□□□□□ -1.75
RIF1-207ENST00000454583 PRDM13Q9H4Q3 707 aa4.11□□□□□ -1.75
RIF1-207ENST00000454583 RANBP3Q9H6Z4 567 aaPredicted RBP4.11□□□□□ -1.75
RIF1-207ENST00000454583 ZNF230Q9UIE0 474 aaPredicted RBP4.11□□□□□ -1.75
RIF1-207ENST00000454583 CSMD3Q7Z407 3707 aa4.11□□□□□ -1.75
RIF1-207ENST00000454583 RFPL4AA6NLU0 287 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 ZNF736B4DX44 427 aaPredicted RBP4.1□□□□□ -1.75
RIF1-207ENST00000454583 RFPL4AL1F8VTS6 287 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 TMEM178BH3BS89 294 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 PSPNO60542 156 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 GNB3P16520 340 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 ZNF93P35789 620 aaPredicted RBP4.1□□□□□ -1.75
RIF1-207ENST00000454583 IL13RA2Q14627 380 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 PVRIGQ6DKI7 326 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 LUZP2Q86TE4 346 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 SLC7A5P1Q8MH63 180 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 Q8N7P7 452 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 OR10AD1Q8NGE0 317 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 LINC01560Q8TB33 94 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 TNFRSF14Q92956 283 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 RRNAD1Q96FB5 475 aaKnown RBP4.1□□□□□ -1.75
RIF1-207ENST00000454583 SYT3Q9BQG1 590 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 ZNF251Q9BRH9 671 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 AGMATQ9BSE5 352 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 CST11Q9H112 138 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 RERGLQ9H628 205 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 ZNF462Q96JM2 2506 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 FAM240BA0A1B0GVZ2 78 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 CRYM-AS1A6NIL9 109 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 OR5B21A6NL26 309 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 ARPC1BO15143 372 aaKnown RBP4.1□□□□□ -1.75
RIF1-207ENST00000454583 DUS4LO95620 317 aaKnown RBP4.1□□□□□ -1.75
RIF1-207ENST00000454583 APOC1P02654 83 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 CD79AP11912 226 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 ZNF823P16415 610 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 MDKP21741 143 aaPredicted RBP4.1□□□□□ -1.75
RIF1-207ENST00000454583 ATP6V1E1P36543 226 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 RND3P61587 244 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 ANKRD55Q3KP44 614 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 ZFP69Q49AA0 526 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 PDLIM3Q53GG5 364 aaPredicted RBP4.1□□□□□ -1.75
RIF1-207ENST00000454583 C9orf135Q5VTT2 229 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 LYG2Q86SG7 212 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 LRRC75A-AS1Q8N1F1 130 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 ARRDC1Q8N5I2 433 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 C19orf18Q8NEA5 215 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 ZNF680Q8NEM1 530 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 OR4S1Q8NGB4 309 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 OR1S1Q8NH92 325 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 CAPSLQ8WWF8 208 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 ERGIC1Q969X5 290 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 MSI2Q96DH6 328 aaKnown RBP4.1□□□□□ -1.75
RIF1-207ENST00000454583 MRPS24Q96EL2 167 aaKnown RBP4.1□□□□□ -1.75
RIF1-207ENST00000454583 PLPPR2Q96GM1 343 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 ARHGAP5-AS1Q96IT6 56 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 PLEK2Q9NYT0 353 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 TMEM235A6NFC5 223 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 SERPINE3A8MV23 424 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 FAM25AB3EWG3 89 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 FAM25CB3EWG5 89 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 FAM25GB3EWG6 89 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 SYT7O43581 403 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 PITX3O75364 302 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 FGF2P09038 288 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 H2AFB1P0C5Y9 115 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 BCL3P20749 454 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 FPR2P25090 351 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 APOBEC3AP31941 199 aaPredicted RBP4.1□□□□□ -1.75
RIF1-207ENST00000454583 PRSS3P35030 304 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 CD83Q01151 205 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 PCGF3Q3KNV8 242 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 GLIPR1L1Q6UWM5 242 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 MOB3CQ70IA8 216 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 UBE2J2Q8N2K1 259 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 BHLHE23Q8NDY6 225 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 CSNK2A3Q8NEV1 391 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 ENKURQ8TC29 256 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 NINJ1Q92982 152 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 BEX2Q9BXY8 128 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 OR10A2Q9H208 303 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 UNKLQ9H9P5 680 aaKnown RBP4.1□□□□□ -1.75
RIF1-207ENST00000454583 KIF25Q9UIL4 384 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 GAB2Q9UQC2 676 aa4.1□□□□□ -1.75
RIF1-207ENST00000454583 TRAV6A0A075B6T7 132 aa4.09□□□□□ -1.75
RIF1-207ENST00000454583 ANXA2P2A6NMY6 339 aa4.09□□□□□ -1.75
RIF1-207ENST00000454583 ODF3BA8MYP8 253 aa4.09□□□□□ -1.75
RIF1-207ENST00000454583 IFNL4K9M1U5 179 aa4.09□□□□□ -1.75
RIF1-207ENST00000454583 F2RL2O00254 374 aa4.09□□□□□ -1.75
RIF1-207ENST00000454583 ANXA2P07355 339 aaKnown RBP4.09□□□□□ -1.75
RIF1-207ENST00000454583 FCGR3AP08637 254 aa4.09□□□□□ -1.75
RIF1-207ENST00000454583 NMBP08949 121 aa4.09□□□□□ -1.75
RIF1-207ENST00000454583 RRASP10301 218 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms