RNA–Protein interactions for RNA: ENST00000454569.5

SCN9A-205, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

TSL 1 (best)

Gene SCN9A, Length 1,585 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-205ENST00000454569 FAM90A16PA6NEW6 464 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 FAM90A20PA6NIJ5 464 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 FAM90A8PA6NJQ4 464 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 FAM90A7PA6NKC0 464 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 FAM90A22PA8MWA6 464 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 FAM90A12PA8MX19 464 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 FAM90A5PA8MXJ8 464 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 FAM90A23PA8MXZ1 464 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 SH2D1BO14796 132 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 ZNF737O75373 536 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 MELTFP08582 738 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 FAM90A15PP0C7V4 464 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 FAM90A13PP0C7W8 464 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 FAM90A14PP0C7W9 464 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 FAM90A24PP0C7X0 464 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 OR3A1P47881 315 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 MRPS10P82664 201 aaKnown RBP9.15□□□□□ -0.95
SCN9A-205ENST00000454569 OXA1LQ15070 435 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 CARTPTQ16568 116 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 MPV17LQ2QL34 196 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 SPIN3Q5JUX0 258 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 ZNF57Q68EA5 555 aaPredicted RBP9.15□□□□□ -0.95
SCN9A-205ENST00000454569 ZNF788Q6ZQV5 615 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 TPRX1Q8N7U7 411 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 SMIM4Q8WVI0 70 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 TRIM63Q969Q1 353 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 PERPQ96FX8 193 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 NEDD4LQ96PU5 975 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 DPCDQ9BVM2 203 aaPredicted RBP9.15□□□□□ -0.95
SCN9A-205ENST00000454569 IFT22Q9H7X7 185 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 ZNF701Q9NV72 531 aaPredicted RBP9.15□□□□□ -0.95
SCN9A-205ENST00000454569 ZNF230Q9UIE0 474 aaPredicted RBP9.15□□□□□ -0.95
SCN9A-205ENST00000454569 HSF4Q9ULV5 492 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 WNK2Q9Y3S1 2297 aa9.15□□□□□ -0.95
SCN9A-205ENST00000454569 NAV2Q8IVL1 2488 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 A0A0A6YYH2 397 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 A6NJ64 397 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 LRRC30A6NM36 301 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 GSTZ1O43708 216 aaPredicted RBP9.14□□□□□ -0.95
SCN9A-205ENST00000454569 ORC5O43913 435 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 SCGNO76038 276 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 TPPPO94811 219 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 MUC1P15941 1255 aaPredicted RBP9.14□□□□□ -0.95
SCN9A-205ENST00000454569 BTG1P62324 171 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 ASAH1Q13510 395 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 ATXN7L3Q14CW9 347 aaPredicted RBP9.14□□□□□ -0.95
SCN9A-205ENST00000454569 MICBQ29980 383 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 PAN3Q58A45 887 aaKnown RBP9.14□□□□□ -0.95
SCN9A-205ENST00000454569 HACD4Q5VWC8 232 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 Q6ZNX1 250 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 GPX8Q8TED1 209 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 COQ2Q96H96 371 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 NUDT16L1Q9BRJ7 211 aaKnown RBP9.14□□□□□ -0.95
SCN9A-205ENST00000454569 DCTN5Q9BTE1 182 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP9.14□□□□□ -0.95
SCN9A-205ENST00000454569 DLL4Q9NR61 685 aa9.14□□□□□ -0.95
SCN9A-205ENST00000454569 FBXO9Q9UK97 447 aaPredicted RBP9.14□□□□□ -0.95
SCN9A-205ENST00000454569 CR1P17927 2039 aa9.13□□□□□ -0.95
SCN9A-205ENST00000454569 hCG_2014768A0A024R1R8 64 aa9.13□□□□□ -0.95
SCN9A-205ENST00000454569 GABARAPH6UMI1 98 aa9.13□□□□□ -0.95
SCN9A-205ENST00000454569 PPIHO43447 177 aaKnown RBP9.13□□□□□ -0.95
SCN9A-205ENST00000454569 PRSS3P35030 304 aa9.13□□□□□ -0.95
SCN9A-205ENST00000454569 ATP5J2P56134 94 aa9.13□□□□□ -0.95
SCN9A-205ENST00000454569 SEC61A1P61619 476 aaKnown RBP9.13□□□□□ -0.95
SCN9A-205ENST00000454569 MRPS11P82912 194 aaKnown RBP9.13□□□□□ -0.95
SCN9A-205ENST00000454569 AESQ08117 197 aa9.13□□□□□ -0.95
SCN9A-205ENST00000454569 FAM189A2Q15884 450 aa9.13□□□□□ -0.95
SCN9A-205ENST00000454569 ATPAF1Q5TC12 328 aaPredicted RBP9.13□□□□□ -0.95
SCN9A-205ENST00000454569 C1orf87Q8N0U7 546 aa9.13□□□□□ -0.95
SCN9A-205ENST00000454569 ASCC1Q8N9N2 400 aaKnown RBP9.13□□□□□ -0.95
SCN9A-205ENST00000454569 OR4K15Q8NH41 348 aa9.13□□□□□ -0.95
SCN9A-205ENST00000454569 FCAMRQ8WWV6 532 aa9.13□□□□□ -0.95
SCN9A-205ENST00000454569 SDSLQ96GA7 329 aa9.13□□□□□ -0.95
SCN9A-205ENST00000454569 COX4I2Q96KJ9 171 aa9.13□□□□□ -0.95
SCN9A-205ENST00000454569 NARFLQ9H6Q4 476 aa9.13□□□□□ -0.95
SCN9A-205ENST00000454569 CHODLQ9H9P2 273 aa9.13□□□□□ -0.95
SCN9A-205ENST00000454569 ZNF469Q96JG9 3925 aaPredicted RBP9.13□□□□□ -0.95
SCN9A-205ENST00000454569 AKAP9Q99996 3911 aa9.13□□□□□ -0.95
SCN9A-205ENST00000454569 TRAV38-1A0A0B4J264 116 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 K7N7A8 449 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 IFNL4K9M1U5 179 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 GSTP1P09211 210 aaKnown RBP9.12□□□□□ -0.95
SCN9A-205ENST00000454569 GLIPR1P48060 266 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 ARFRP1Q13795 201 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 RSBN1Q5VWQ0 802 aaPredicted RBP9.12□□□□□ -0.95
SCN9A-205ENST00000454569 OR52W1Q6IF63 320 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 MZT2BQ6NZ67 158 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 TRAPPC6BQ86SZ2 158 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 LINC00596Q86U02 117 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 TOMM5Q8N4H5 51 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 MRPL30Q8TCC3 161 aaKnown RBP9.12□□□□□ -0.95
SCN9A-205ENST00000454569 RHOVQ96L33 236 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 MDFIQ99750 246 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 RBMX2Q9Y388 322 aaKnown RBP9.12□□□□□ -0.95
SCN9A-205ENST00000454569 CEACAM18A8MTB9 384 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 MCRIP1C9JLW8 97 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 SIGLEC5O15389 551 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 TMPRSS2O15393 492 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 PLA2G10O15496 165 aa9.12□□□□□ -0.95
SCN9A-205ENST00000454569 LYRM1O43325 122 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms