RNA–Protein interactions for RNA: ENST00000453854.1

HMGB1P15-201, Transcript of high mobility group box 1 pseudogene 15, humanhuman

BASIC

Gene HMGB1P15, Length 435 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P15-201ENST00000453854 RAB26Q9ULW5 256 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 MOKQ9UQ07 419 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 SLC25A15Q9Y619 301 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 SETXQ7Z333 2677 aaKnown RBP2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 AGRNO00468 2067 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 EPG5Q9HCE0 2579 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 VWA8A3KMH1 1905 aa2.76□□□□□ -1.97
HMGB1P15-201ENST00000453854 PLXNA3P51805 1871 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 ABCC12Q96J65 1359 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 ATRXP46100 2492 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 IGLV1-36A0A0B4J1U3 117 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 FAM168BA1KXE4 195 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 CEACAM18A8MTB9 384 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 H0Y9J4 135 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 H7C1H1 209 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 MYL12BO14950 172 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 RAD1O60671 282 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 ENTPD6O75354 484 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 CNMDO75829 334 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 SERF1AO75920 110 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 SLC25A27O95847 323 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 IGHV3-23P01764 117 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 CD74P04233 296 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 CSF3P09919 207 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 P0C879 139 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 CD1EP15812 388 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 ATF1P18846 271 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 TCN2P20062 427 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 CFL1P23528 166 aaKnown RBP2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 HTR1EP28566 365 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 SSTR5P35346 364 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 SULT1A1P50225 295 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 SULT1A2P50226 295 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 PPOXP50336 477 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 ERFP50548 548 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 DSCR10P59022 87 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 RAB4BP61018 213 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 PRR3P79522 188 aaKnown RBP2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 FAM3AP98173 230 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 IL5RAQ01344 420 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 EGFEM1PQ0D2K5 195 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 FZD2Q14332 565 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 POU6F1Q14863 301 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 PRR30Q53SZ7 412 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 YIF1BQ5BJH7 314 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 MARC1Q5VT66 337 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 METTL21CQ5VZV1 264 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 KCTD16Q68DU8 428 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 ZNF774Q6NX45 483 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 TNFAIP8L2Q6P589 184 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 UGT2A3Q6UWM9 527 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 CASP12Q6UXS9 341 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 Q6ZVH6 145 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 FAM183BPQ6ZVS7 135 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 NIT1Q86X76 327 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 FAM71E2Q8N5Q1 922 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 GATD1Q8NB37 220 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR1S1Q8NH92 325 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 NEIL3Q8TAT5 605 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 DTD1Q8TEA8 209 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 DYDC1Q8WWB3 177 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 GEMIN6Q8WXD5 167 aaKnown RBP2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 RGP1Q92546 391 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 FAM3DQ96BQ1 224 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 RNF185Q96GF1 192 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 FCRL1Q96LA6 429 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 CEP19Q96LK0 163 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 ZNF184Q99676 751 aaPredicted RBP2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 NIPSNAP1Q9BPW8 284 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 NUDT9Q9BW91 350 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 ULBP1Q9BZM6 244 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 Q9H3A6 140 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 SRMSQ9H3Y6 488 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 POMKQ9H5K3 350 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 ZDHHC11Q9H8X9 412 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 UGT1A7Q9HAW7 530 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 UGT1A8Q9HAW9 530 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 C19orf12Q9NSK7 152 aa2.75□□□□□ -1.97
HMGB1P15-201ENST00000453854 DMXL1Q9Y485 3027 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 KRTAP9-6A8MVA2 160 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 EFCAB9A8MZ26 197 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 F5H5T6 163 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 XKRYO14609 159 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 SRSF10O75494 262 aaKnown RBP2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR2B3O76000 313 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 KLF8O95600 359 aaPredicted RBP2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 IGHV3-48P01763 117 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 EIF4EP06730 217 aaKnown RBP2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 CCL5P13501 91 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 CD36P16671 472 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 ALOX5APP20292 161 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 RAB3AP20336 220 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 TGFBR2P37173 567 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 GCLMP48507 274 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 CDKN2DP55273 166 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 TAS2R19P59542 299 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 KRTAP10-12P60413 245 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 KRR1Q13601 381 aaKnown RBP2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 OR2F1Q13607 317 aa2.74□□□□□ -1.97
HMGB1P15-201ENST00000453854 KIAA0040Q15053 153 aa2.74□□□□□ -1.97
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms