RNA–Protein interactions for RNA: ENST00000451218.6

USP46-202, Transcript of ubiquitin specific peptidase 46, humanhuman

TSL 5 BASIC

Gene USP46, Length 4,622 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP46-202ENST00000451218 CTAG1AP78358 180 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 NAAAQ02083 359 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 CR1LQ2VPA4 569 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 TMEM65Q6PI78 240 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 OR11L1Q8NGX0 322 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 CLEC4MQ9H2X3 399 aaPredicted RBP5.54□□□□□ -1.52
USP46-202ENST00000451218 EIF3KQ9UBQ5 218 aaKnown RBP5.54□□□□□ -1.52
USP46-202ENST00000451218 TINAGQ9UJW2 476 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 ARFGEF3Q5TH69 2177 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 A0A0B4J2A0 478 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 PROP1O75360 226 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 HTR3BO95264 441 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 IGKV1-39P01597 117 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 IGKV1D-39P04432 117 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 CSN2P05814 226 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 P0C879 139 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 RPA2P15927 270 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 CEBPDP49716 269 aaPredicted RBP5.54□□□□□ -1.52
USP46-202ENST00000451218 SURF2Q15527 256 aaPredicted RBP5.54□□□□□ -1.52
USP46-202ENST00000451218 TMEM128Q5BJH2 165 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 RNASE10Q5GAN6 216 aaKnown RBP5.54□□□□□ -1.52
USP46-202ENST00000451218 LIN54Q6MZP7 749 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 FAM90A1Q86YD7 464 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 CCDC36Q8IYA8 594 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 ZNF680Q8NEM1 530 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 PPP1R35Q8TAP8 253 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 GLYATL2Q8WU03 294 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 GALNT14Q96FL9 552 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 ST6GALNAC5Q9BVH7 336 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 SHPKQ9UHJ6 478 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 TUBD1Q9UJT1 453 aa5.54□□□□□ -1.52
USP46-202ENST00000451218 PURGQ9UJV8 347 aaKnown RBP5.54□□□□□ -1.52
USP46-202ENST00000451218 PIEZO1Q92508 2521 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 LRP5LA4QPB2 252 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 ZSCAN5BA6NJL1 495 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 RFPL4AA6NLU0 287 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 RFPL4AL1F8VTS6 287 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 ZNF737O75373 536 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 HLA-AP01891 365 aaKnown RBP5.53□□□□□ -1.52
USP46-202ENST00000451218 CGB3P0DN86 165 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 CGB7P0DN87 165 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 HNF1AP20823 631 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 ECI1P42126 302 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 IDH3GP51553 393 aaPredicted RBP5.53□□□□□ -1.52
USP46-202ENST00000451218 UCP3P55916 312 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 GRK1Q15835 563 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 BHLHA15Q7RTS1 189 aaPredicted RBP5.53□□□□□ -1.52
USP46-202ENST00000451218 CD177Q8N6Q3 437 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 CHST4Q8NCG5 386 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 CSNK2A3Q8NEV1 391 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 OR8G5Q8NG78 346 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 TP53RKQ96S44 253 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 RANBP3Q9H6Z4 567 aaPredicted RBP5.53□□□□□ -1.52
USP46-202ENST00000451218 CACNA1DQ01668 2161 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 FLNCQ14315 2725 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 UBE2QL1A1L167 161 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 OR5B21A6NL26 309 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 SNCGO76070 127 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 CCNOP22674 350 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 FAM27E3Q08E93 113 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 EXOSC2Q13868 293 aaKnown RBP5.53□□□□□ -1.52
USP46-202ENST00000451218 HMGN3Q15651 99 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 MPV17LQ2QL34 196 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 ZNF585AQ6P3V2 769 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 GSG1LQ6UXU4 331 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 FAM222BQ8WU58 562 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 URM1Q9BTM9 101 aaKnown RBP5.53□□□□□ -1.52
USP46-202ENST00000451218 C1QTNF6Q9BXI9 259 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 RHOFQ9HBH0 211 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 TREM2Q9NZC2 230 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 RBM7Q9Y580 266 aaKnown RBP5.53□□□□□ -1.52
USP46-202ENST00000451218 HEATR1Q9H583 2144 aaKnown RBP5.53□□□□□ -1.52
USP46-202ENST00000451218 CHD8Q9HCK8 2581 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 IGKV1D-17A0A075B6S4 117 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 LEUTXA8MZ59 168 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 C15orf65H3BRN8 121 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 J3QT63 122 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 OR2H2O95918 312 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 RCC1P18754 421 aaPredicted RBP5.53□□□□□ -1.52
USP46-202ENST00000451218 FUT3P21217 361 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 DUSP1P28562 367 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 GNG2P59768 71 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 RAP2BP61225 183 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 RBM39Q14498 530 aaKnown RBP5.53□□□□□ -1.52
USP46-202ENST00000451218 IL13RA2Q14627 380 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 P2RY6Q15077 328 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 RSU1Q15404 277 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 ACTBL2Q562R1 376 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 TIMM23BQ5SRD1 257 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 SLC25A24Q6NUK1 477 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 DUX4L9Q6RFH8 374 aaPredicted RBP5.53□□□□□ -1.52
USP46-202ENST00000451218 ZNF818PQ6ZRF7 136 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 ZNF826PQ6ZT77 177 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 LINC00596Q86U02 117 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 LILRB4Q8NHJ6 448 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 ASB13Q8WXK3 278 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 GPER1Q99527 375 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 OR5AC2Q9NZP5 309 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 PRELID3BQ9Y3B1 194 aa5.53□□□□□ -1.52
USP46-202ENST00000451218 HSPB11Q9Y547 144 aa5.53□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms