RNA–Protein interactions for RNA: ENST00000449880.6

ITGB4-202, Transcript of integrin subunit beta 4, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene ITGB4, Length 5,689 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ITGB4-202ENST00000449880 TMEM230Q96A57 120 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 SIAH2O43255 324 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 PIAS2O75928 621 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 FGF8P55075 233 aaPredicted RBP12.29□□□□□ -0.44
ITGB4-202ENST00000449880 PMCHL1Q16048 86 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 MRPL24Q96A35 216 aaKnown RBP12.29□□□□□ -0.44
ITGB4-202ENST00000449880 WFIKKN1Q96NZ8 548 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 GABRG3Q99928 467 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 KCNE5Q9UJ90 142 aa12.29□□□□□ -0.44
ITGB4-202ENST00000449880 ALG1L2C9J202 215 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 C16orf82Q7Z2V1 217 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 MTURNQ8N3F0 131 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 ELOVL1Q9BW60 279 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 TAAR3PQ9P1P4 343 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 WNT16Q9UBV4 365 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 DIRC3C9JPN6 131 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 B4GALT1P15291 398 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 BRS3P32247 399 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 HIST1H2BAQ96A08 127 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 BARX1Q9HBU1 254 aaPredicted RBP12.28□□□□□ -0.44
ITGB4-202ENST00000449880 TRGV10A0A0A0MS01 117 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 IGHV3-64DA0A0J9YX35 117 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 A0A1W2PQD3 144 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 GALNSP34059 522 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 IL11RAQ14626 422 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 AMER3Q8N944 861 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 OR11H4Q8NGC9 324 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 ASB10Q8WXI3 467 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 BCL2L2Q92843 193 aaPredicted RBP12.28□□□□□ -0.44
ITGB4-202ENST00000449880 OR2A5Q96R48 311 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 UQCR10Q9UDW1 63 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 WDR90Q96KV7 1748 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 HTR1DP28221 377 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 LRRC10Q5BKY1 277 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 TMEM211Q6ICI0 200 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 PRSS3P2Q8NHM4 247 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 GGACTQ9BVM4 153 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 NPDC1Q9NQX5 325 aaPredicted RBP12.28□□□□□ -0.44
ITGB4-202ENST00000449880 TECRQ9NZ01 308 aaKnown RBP12.28□□□□□ -0.44
ITGB4-202ENST00000449880 IGHV3-15A0A0B4J1V0 119 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 BMI1P35226 326 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 OR1C1Q15619 314 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 C10orf111Q8N326 155 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 OR5D13Q8NGL4 314 aa12.28□□□□□ -0.44
ITGB4-202ENST00000449880 NUDT16L1Q9BRJ7 211 aaKnown RBP12.28□□□□□ -0.44
ITGB4-202ENST00000449880 K7EQS6 105 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 PRF1P14222 555 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 ATP6V0CP27449 155 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 PCP4P48539 62 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 PLPPR5Q32ZL2 321 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 BPIFA4PQ86YQ2 179 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 OR2D3Q8NGH3 330 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 KLK13Q9UKR3 277 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 MYO16Q9Y6X6 1858 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 TRBV5-5A0A0J9YX44 114 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 NDUFB3O43676 98 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 CD8AP01732 235 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 RAB7AP51149 207 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 CEACAM16Q2WEN9 425 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 MESTQ5EB52 335 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 ASB5Q8WWX0 329 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 TMEM56Q96MV1 263 aa12.27□□□□□ -0.44
ITGB4-202ENST00000449880 HIST3H3Q16695 136 aa12.27□□□□□ -0.45
ITGB4-202ENST00000449880 TMEM251Q8N6I4 163 aa12.27□□□□□ -0.45
ITGB4-202ENST00000449880 RGP1Q92546 391 aaPredicted RBP12.27□□□□□ -0.45
ITGB4-202ENST00000449880 BRCA1P38398 1863 aaKnown RBP12.27□□□□□ -0.45
ITGB4-202ENST00000449880 ADAM11O75078 769 aa12.27□□□□□ -0.45
ITGB4-202ENST00000449880 MT-CO3P00414 261 aa12.27□□□□□ -0.45
ITGB4-202ENST00000449880 BCL3P20749 454 aa12.27□□□□□ -0.45
ITGB4-202ENST00000449880 SLC36A1Q7Z2H8 476 aa12.27□□□□□ -0.45
ITGB4-202ENST00000449880 C17orf78Q8N4C9 275 aa12.27□□□□□ -0.45
ITGB4-202ENST00000449880 C11orf42Q8N5U0 333 aa12.27□□□□□ -0.45
ITGB4-202ENST00000449880 MRPL30Q8TCC3 161 aaKnown RBP12.27□□□□□ -0.45
ITGB4-202ENST00000449880 FOXB1Q99853 325 aa12.27□□□□□ -0.45
ITGB4-202ENST00000449880 ERRFI1Q9UJM3 462 aaPredicted RBP12.27□□□□□ -0.45
ITGB4-202ENST00000449880 SF3B6Q9Y3B4 125 aaKnown RBP12.27□□□□□ -0.45
ITGB4-202ENST00000449880 A0A1B0GTH9 108 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 SCGB1C2P0DMR2 95 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 OR3A1P47881 315 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 RPL24P83731 157 aaKnown RBP12.26□□□□□ -0.45
ITGB4-202ENST00000449880 LEMD1Q68G75 181 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 ZNF600Q6ZNG1 722 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 ATG4DQ86TL0 474 aaPredicted RBP12.26□□□□□ -0.45
ITGB4-202ENST00000449880 CDC42EP3Q9UKI2 254 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 CHST1O43916 411 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 TMEM92Q6UXU6 159 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 LINC00596Q86U02 117 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 FAM219AQ8IW50 185 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 SDHCQ99643 169 aaPredicted RBP12.26□□□□□ -0.45
ITGB4-202ENST00000449880 MYOZ1Q9NP98 299 aaPredicted RBP12.26□□□□□ -0.45
ITGB4-202ENST00000449880 PAM16Q9Y3D7 125 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 MAP1BP46821 2468 aaKnown RBP12.26□□□□□ -0.45
ITGB4-202ENST00000449880 F12P00748 615 aaPredicted RBP12.26□□□□□ -0.45
ITGB4-202ENST00000449880 ETV3LQ6ZN32 361 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 ZBTB34Q8NCN2 500 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 TLNRD1Q9H1K6 362 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 KCNK7Q9Y2U2 307 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 ISLRO14498 428 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 RER1O15258 196 aa12.26□□□□□ -0.45
ITGB4-202ENST00000449880 GREM1O60565 184 aa12.26□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms