RNA–Protein interactions for RNA: ENST00000449684.6

LIMS1-210, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 5

Gene LIMS1, Length 492 nt, Biotype processed transcript, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-210ENST00000449684 KIAA2026Q5HYC2 2103 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 DMKNQ6E0U4 476 aaPredicted RBP12.54□□□□□ -0.4
LIMS1-210ENST00000449684 C11orf88Q6PI97 169 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 HEPN1Q6WQI6 88 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 Q6ZTK2 550 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 OSR2Q8N2R0 312 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 OR51T1Q8NGJ9 327 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 CDCA4Q9BXL8 241 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 PSORS1C1Q9UIG5 152 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 TCF19Q9Y242 345 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 ERGIC3Q9Y282 383 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 SIGLEC9Q9Y336 463 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 TRRAPQ9Y4A5 3859 aa12.54□□□□□ -0.4
LIMS1-210ENST00000449684 A0A1W2PPK0 400 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 FAM172BPA6NC97 362 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 ZNF729A6NN14 1252 aaPredicted RBP12.53□□□□□ -0.4
LIMS1-210ENST00000449684 ZNF780AO75290 641 aaPredicted RBP12.53□□□□□ -0.4
LIMS1-210ENST00000449684 PEX14O75381 377 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 SERPINA2P20848 420 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 NFYBP25208 207 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 CEACAM3P40198 252 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 WNT4P56705 351 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 PIGYQ3MUY2 71 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 TMEM219Q86XT9 240 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 JAGN1Q8N5M9 183 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 PIFOQ8TCI5 191 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 CAPSLQ8WWF8 208 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 CREB3L1Q96BA8 519 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 ORAI1Q96D31 301 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 COQ2Q96H96 371 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 ZNF184Q99676 751 aaPredicted RBP12.53□□□□□ -0.4
LIMS1-210ENST00000449684 PPIL3Q9H2H8 161 aaKnown RBP12.53□□□□□ -0.4
LIMS1-210ENST00000449684 PLCXD1Q9NUJ7 323 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 DPM3Q9P2X0 92 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 KIF25Q9UIL4 384 aa12.53□□□□□ -0.4
LIMS1-210ENST00000449684 TRAV24A0A0B4J272 114 aa12.52□□□□□ -0.41
LIMS1-210ENST00000449684 TRBV5-5A0A0J9YX44 114 aa12.52□□□□□ -0.41
LIMS1-210ENST00000449684 LEUTXA8MZ59 168 aa12.52□□□□□ -0.41
LIMS1-210ENST00000449684 CHST1O43916 411 aa12.52□□□□□ -0.41
LIMS1-210ENST00000449684 OR7C1O76099 320 aaPredicted RBP12.52□□□□□ -0.41
LIMS1-210ENST00000449684 CELP19835 753 aa12.52□□□□□ -0.41
LIMS1-210ENST00000449684 BRS3P32247 399 aa12.52□□□□□ -0.41
LIMS1-210ENST00000449684 KCNJ3P48549 501 aa12.52□□□□□ -0.41
LIMS1-210ENST00000449684 GPR176Q14439 515 aa12.52□□□□□ -0.41
LIMS1-210ENST00000449684 RBM39Q14498 530 aaKnown RBP12.52□□□□□ -0.41
LIMS1-210ENST00000449684 SLC22A6Q4U2R8 563 aa12.52□□□□□ -0.41
LIMS1-210ENST00000449684 NEK7Q8TDX7 302 aa12.52□□□□□ -0.41
LIMS1-210ENST00000449684 OR14A2Q96R54 314 aa12.52□□□□□ -0.41
LIMS1-210ENST00000449684 PRSS22Q9GZN4 317 aa12.52□□□□□ -0.41
LIMS1-210ENST00000449684 SCN3BQ9NY72 215 aa12.52□□□□□ -0.41
LIMS1-210ENST00000449684 IL36GQ9NZH8 169 aa12.52□□□□□ -0.41
LIMS1-210ENST00000449684 KBTBD11-OT1A0A1B0GTJ5 212 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 A6NDX4 124 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 PTGES3LE9PB15 166 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 MAS1P04201 325 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 VSIG10L2P0DP72 767 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 GTF2F2P13984 249 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 MAPK3P27361 379 aaPredicted RBP12.51□□□□□ -0.41
LIMS1-210ENST00000449684 DYNLT3P51808 116 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 BDH1Q02338 343 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 HERPUD1Q15011 391 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 C2orf68Q2NKX9 166 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 LDLRAD2Q5SZI1 272 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 ATAD3CQ5T2N8 411 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 BAIAP2L2Q6UXY1 529 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 ASCL4Q6XD76 172 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 LINC00596Q86U02 117 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 Q8NFD4 153 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 OR4P4Q8NGL7 312 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 THRSPQ92748 146 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 TFAP2CQ92754 450 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 MYDGFQ969H8 173 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 PGLYRP3Q96LB9 341 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 DPCDQ9BVM2 203 aaPredicted RBP12.51□□□□□ -0.41
LIMS1-210ENST00000449684 MMP27Q9H306 513 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 CALYQ9NYX4 217 aa12.51□□□□□ -0.41
LIMS1-210ENST00000449684 JUNBP17275 347 aaPredicted RBP12.5□□□□□ -0.41
LIMS1-210ENST00000449684 IGFBP3P17936 291 aaPredicted RBP12.5□□□□□ -0.41
LIMS1-210ENST00000449684 MNDAP41218 407 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 EFNB2P52799 333 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 RBM11P57052 281 aaKnown RBP12.5□□□□□ -0.41
LIMS1-210ENST00000449684 LTC4SQ16873 150 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 CCBE1Q6UXH8 406 aaPredicted RBP12.5□□□□□ -0.41
LIMS1-210ENST00000449684 KLHDC1Q8N7A1 406 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 NANOGP1Q8N7R0 232 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 SUMF2Q8NBJ7 301 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 ZNF485Q8NCK3 441 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 OR13A1Q8NGR1 328 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 OR9G1Q8NH87 305 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 MRGPRDQ8TDS7 321 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 FBLIM1Q8WUP2 373 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 MUL1Q969V5 352 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 AKR1E2Q96JD6 320 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 MND1Q9BWT6 205 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 NCOR1P1Q9H4R4 102 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 ZNF286AQ9HBT8 521 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 NKX1-2Q9UD57 310 aaPredicted RBP12.5□□□□□ -0.41
LIMS1-210ENST00000449684 FOXJ3Q9UPW0 622 aa12.5□□□□□ -0.41
LIMS1-210ENST00000449684 MRPS28Q9Y2Q9 187 aaKnown RBP12.5□□□□□ -0.41
LIMS1-210ENST00000449684 TRAV8-7A0A075B6U6 113 aa12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms