RNA–Protein interactions for RNA: ENST00000449223.3

RPS28-202, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 1,523 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-202ENST00000449223 TMEM246Q9BRR3 403 aa16.07■□□□□ 0.16
RPS28-202ENST00000449223 GSX2Q9BZM3 304 aa16.07■□□□□ 0.16
RPS28-202ENST00000449223 PPA2Q9H2U2 334 aa16.07■□□□□ 0.16
RPS28-202ENST00000449223 NKX6-3A6NJ46 265 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 HSPB6O14558 160 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 TK1P04183 234 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 FCGR3AP08637 254 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 CSF1P09603 554 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 GSTT2BP0CG30 244 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 GIFP27352 417 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 GABRA2P47869 451 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 AP3S2P59780 193 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 DYRK1AQ13627 763 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 TMEM155Q4W5P6 130 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 RSBN1Q5VWQ0 802 aaPredicted RBP16.06■□□□□ 0.16
RPS28-202ENST00000449223 ZNF880Q6PDB4 577 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 SLC36A1Q7Z2H8 476 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 HOGA1Q86XE5 327 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 ASCC1Q8N9N2 400 aaKnown RBP16.06■□□□□ 0.16
RPS28-202ENST00000449223 OR4S1Q8NGB4 309 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 OR5D13Q8NGL4 314 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 PLPPR1Q8TBJ4 325 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 NEK7Q8TDX7 302 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 DYRK2Q92630 601 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 RAB1CQ92928 201 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 MED30Q96HR3 178 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 HDHD3Q9BSH5 251 aaPredicted RBP16.06■□□□□ 0.16
RPS28-202ENST00000449223 NCOR1P1Q9H4R4 102 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 ABCA12Q86UK0 2595 aa16.06■□□□□ 0.16
RPS28-202ENST00000449223 MGST3O14880 152 aa16.05■□□□□ 0.16
RPS28-202ENST00000449223 TFF1P04155 84 aa16.05■□□□□ 0.16
RPS28-202ENST00000449223 ERP29P30040 261 aaKnown RBP16.05■□□□□ 0.16
RPS28-202ENST00000449223 ASAH1Q13510 395 aa16.05■□□□□ 0.16
RPS28-202ENST00000449223 RNASE12Q5GAN4 147 aaKnown RBP16.05■□□□□ 0.16
RPS28-202ENST00000449223 SLC35E4Q6ICL7 350 aa16.05■□□□□ 0.16
RPS28-202ENST00000449223 Q6ZPA2 131 aa16.05■□□□□ 0.16
RPS28-202ENST00000449223 TOMM5Q8N4H5 51 aa16.05■□□□□ 0.16
RPS28-202ENST00000449223 TMEM229BQ8NBD8 167 aa16.05■□□□□ 0.16
RPS28-202ENST00000449223 ZNRF1Q8ND25 227 aa16.05■□□□□ 0.16
RPS28-202ENST00000449223 MRPL30Q8TCC3 161 aaKnown RBP16.05■□□□□ 0.16
RPS28-202ENST00000449223 SNAPC3Q92966 411 aa16.05■□□□□ 0.16
RPS28-202ENST00000449223 CCL13Q99616 98 aa16.05■□□□□ 0.16
RPS28-202ENST00000449223 TBC1D24Q9ULP9 559 aa16.05■□□□□ 0.16
RPS28-202ENST00000449223 DSCAML1Q8TD84 2053 aa16.05■□□□□ 0.16
RPS28-202ENST00000449223 NBPF19A0A087WUL8 3843 aa16.05■□□□□ 0.16
RPS28-202ENST00000449223 TBPP20226 339 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 KRTAP10-9P60411 292 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 GRK1Q15835 563 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 GVQW1Q8N7I0 195 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 COQ2Q96H96 371 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 C7orf50Q9BRJ6 194 aaKnown RBP16.04■□□□□ 0.16
RPS28-202ENST00000449223 IFT46Q9NQC8 304 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 MBNL3Q9NUK0 354 aaKnown RBP16.04■□□□□ 0.16
RPS28-202ENST00000449223 ARID1AO14497 2285 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 UNC79Q9P2D8 2635 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 MEIS3P1A6NDR6 274 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 TMPRSS2O15393 492 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 PLA2G10O15496 165 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 MT-ND4P03905 459 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 CD74P04233 296 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 TAS2R19P59542 299 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 ATXN7L3Q14CW9 347 aaPredicted RBP16.04■□□□□ 0.16
RPS28-202ENST00000449223 MOB1BQ7L9L4 216 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 FAM216BQ8N7L0 139 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 NRGNQ92686 78 aa16.04■□□□□ 0.16
RPS28-202ENST00000449223 ANKRD17O75179 2603 aaKnown RBP16.03■□□□□ 0.16
RPS28-202ENST00000449223 TMEM30CPA0ZSE6 113 aa16.03■□□□□ 0.16
RPS28-202ENST00000449223 PPIHO43447 177 aaKnown RBP16.03■□□□□ 0.16
RPS28-202ENST00000449223 INPP1P49441 399 aa16.03■□□□□ 0.16
RPS28-202ENST00000449223 BEST4Q8NFU0 473 aa16.03■□□□□ 0.16
RPS28-202ENST00000449223 Q9N2K0 584 aa16.03■□□□□ 0.16
RPS28-202ENST00000449223 ZNF230Q9UIE0 474 aaPredicted RBP16.03■□□□□ 0.16
RPS28-202ENST00000449223 MGAT4AQ9UM21 535 aa16.03■□□□□ 0.16
RPS28-202ENST00000449223 A0A1B0GW55 424 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 CEACAM18A8MTB9 384 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 NDUFS8O00217 210 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 DUX4L2P0CJ85 424 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 DUX4L3P0CJ86 424 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 DUX4L4P0CJ87 422 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 DUX4L5P0CJ88 424 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 DUX4L6P0CJ89 424 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 DUX4L7P0CJ90 424 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 GPR6P46095 362 aaPredicted RBP16.02■□□□□ 0.15
RPS28-202ENST00000449223 ATP5J2P56134 94 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 DEFA1P59665 94 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 DEFA3P59666 94 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 AESQ08117 197 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 ZNF57Q68EA5 555 aaPredicted RBP16.02■□□□□ 0.15
RPS28-202ENST00000449223 DUX4L9Q6RFH8 374 aaPredicted RBP16.02■□□□□ 0.15
RPS28-202ENST00000449223 ZNF554Q86TJ5 538 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 SPICQ8N5J4 248 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 ZNF525Q8N782 197 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 BEX4Q9NWD9 120 aaPredicted RBP16.02■□□□□ 0.15
RPS28-202ENST00000449223 CTSZQ9UBR2 303 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 DUX4Q9UBX2 424 aa16.02■□□□□ 0.15
RPS28-202ENST00000449223 FUOMA2VDF0 154 aa16.01■□□□□ 0.15
RPS28-202ENST00000449223 ZNF736B4DX44 427 aaPredicted RBP16.01■□□□□ 0.15
RPS28-202ENST00000449223 ADAM20O43506 726 aa16.01■□□□□ 0.15
RPS28-202ENST00000449223 FCN3O75636 299 aa16.01■□□□□ 0.15
RPS28-202ENST00000449223 CD3DP04234 171 aa16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms