RNA–Protein interactions for RNA: ENST00000448971.5

USP39-206, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 3

Gene USP39, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-206ENST00000448971 A0A1W2PP11 408 aa11.88□□□□□ -0.51
USP39-206ENST00000448971 BTBD17A6NE02 478 aa11.88□□□□□ -0.51
USP39-206ENST00000448971 DENRO43583 198 aaKnown RBP11.88□□□□□ -0.51
USP39-206ENST00000448971 RBP4P02753 201 aa11.88□□□□□ -0.51
USP39-206ENST00000448971 CSN2P05814 226 aa11.88□□□□□ -0.51
USP39-206ENST00000448971 RNASE1P07998 156 aaKnown RBP11.88□□□□□ -0.51
USP39-206ENST00000448971 GTF2F2P13984 249 aa11.88□□□□□ -0.51
USP39-206ENST00000448971 ERP29P30040 261 aaKnown RBP11.88□□□□□ -0.51
USP39-206ENST00000448971 TPBGQ13641 420 aa11.88□□□□□ -0.51
USP39-206ENST00000448971 GPR176Q14439 515 aa11.88□□□□□ -0.51
USP39-206ENST00000448971 TRAM1Q15629 374 aa11.88□□□□□ -0.51
USP39-206ENST00000448971 ASCL4Q6XD76 172 aa11.88□□□□□ -0.51
USP39-206ENST00000448971 Q6YL49 198 aa11.88□□□□□ -0.51
USP39-206ENST00000448971 SSMEM1Q8WWF3 244 aa11.88□□□□□ -0.51
USP39-206ENST00000448971 TAF15Q92804 592 aaKnown RBP eCLIP11.88□□□□□ -0.51
USP39-206ENST00000448971 GAL3ST2Q9H3Q3 398 aa11.88□□□□□ -0.51
USP39-206ENST00000448971 ACOT13Q9NPJ3 140 aa11.88□□□□□ -0.51
USP39-206ENST00000448971 ZNRD1Q9P1U0 126 aa11.88□□□□□ -0.51
USP39-206ENST00000448971 ODAMA1E959 279 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 MEGF11A6BM72 1044 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 C17orf98A8MV24 154 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 CLDN34H7C241 214 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 IGHV1-8P0DP01 117 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 CPEP16870 476 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 GLP1RP43220 463 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 GLIPR1P48060 266 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 DLX6P56179 175 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 LGALS4P56470 323 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 MPV17LQ2QL34 196 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 NHLRC3Q5JS37 347 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 ATAD3CQ5T2N8 411 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 GLT8D1Q68CQ7 371 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 HCP5Q6MZN7 132 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 LINC00596Q86U02 117 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 LDLRAD3Q86YD5 345 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 CDH26Q8IXH8 852 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 C11orf42Q8N5U0 333 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 OR4D6Q8NGJ1 314 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 OR13D1Q8NGV5 346 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 NEK7Q8TDX7 302 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 PHYHIPQ92561 330 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 COQ2Q96H96 371 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 UQCC2Q9BRT2 126 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 PPIL3Q9H2H8 161 aaKnown RBP11.87□□□□□ -0.51
USP39-206ENST00000448971 PRDM13Q9H4Q3 707 aa11.87□□□□□ -0.51
USP39-206ENST00000448971 UBE2J1Q9Y385 318 aaPredicted RBP11.87□□□□□ -0.51
USP39-206ENST00000448971 TRAV24A0A0B4J272 114 aa11.86□□□□□ -0.51
USP39-206ENST00000448971 GEMIN2O14893 280 aaKnown RBP11.86□□□□□ -0.51
USP39-206ENST00000448971 MRPS14O60783 128 aaKnown RBP11.86□□□□□ -0.51
USP39-206ENST00000448971 CRTAPO75718 401 aaPredicted RBP11.86□□□□□ -0.51
USP39-206ENST00000448971 SC5DO75845 299 aa11.86□□□□□ -0.51
USP39-206ENST00000448971 ARL6IP5O75915 188 aa11.86□□□□□ -0.51
USP39-206ENST00000448971 IGHV4-59P01825 116 aa11.86□□□□□ -0.51
USP39-206ENST00000448971 ARG1P05089 322 aa11.86□□□□□ -0.51
USP39-206ENST00000448971 UCHL1P09936 223 aa11.86□□□□□ -0.51
USP39-206ENST00000448971 GABRA5P31644 462 aa11.86□□□□□ -0.51
USP39-206ENST00000448971 DYNC1I2Q13409 638 aaKnown RBP11.86□□□□□ -0.51
USP39-206ENST00000448971 MIDNQ504T8 468 aa11.86□□□□□ -0.51
USP39-206ENST00000448971 PRAMEF5Q5TYX0 476 aa11.86□□□□□ -0.51
USP39-206ENST00000448971 UNQ9370/PRO34162Q6UXP9 181 aa11.86□□□□□ -0.51
USP39-206ENST00000448971 TMEM86BQ8N661 226 aa11.86□□□□□ -0.51
USP39-206ENST00000448971 Q8NFD4 153 aa11.86□□□□□ -0.51
USP39-206ENST00000448971 FOXRED1Q96CU9 486 aaPredicted RBP11.86□□□□□ -0.51
USP39-206ENST00000448971 DPCDQ9BVM2 203 aaPredicted RBP11.86□□□□□ -0.51
USP39-206ENST00000448971 DPAGT1Q9H3H5 408 aa11.86□□□□□ -0.51
USP39-206ENST00000448971 POMT1Q9Y6A1 747 aa11.86□□□□□ -0.51
USP39-206ENST00000448971 SESN1Q9Y6P5 492 aa11.86□□□□□ -0.51
USP39-206ENST00000448971 MEIKINA0A087WXM9 373 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 J3QL48 77 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 MGMTP16455 207 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 PSMB9P28065 219 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 KCNJ3P48549 501 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 EMX1Q04741 257 aaPredicted RBP11.85□□□□□ -0.51
USP39-206ENST00000448971 TAF9Q16594 264 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 LRRTM1Q86UE6 522 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 SUMF2Q8NBJ7 301 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 FAM46BQ96A09 425 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 BARHL1Q9BZE3 327 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 CHIAQ9BZP6 476 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 CST11Q9H112 138 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 BANF2Q9H503 90 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 OR6C3Q9NZP0 311 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 ZNF581Q9P0T4 197 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 KIF25Q9UIL4 384 aa11.85□□□□□ -0.51
USP39-206ENST00000448971 CRYBA1P05813 215 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 UBBP0CG47 229 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 SRMP19623 302 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 CDK2P24941 298 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 CALRP27797 417 aaKnown RBP11.84□□□□□ -0.51
USP39-206ENST00000448971 IER3P46695 156 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 GP2P55259 537 aaKnown RBP11.84□□□□□ -0.51
USP39-206ENST00000448971 FABP5Q01469 135 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 C16orf87Q6PH81 154 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 PLPPR1Q8TBJ4 325 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 C17orf50Q8WW18 174 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 FCGR1BQ92637 280 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 MRPS24Q96EL2 167 aaKnown RBP11.84□□□□□ -0.51
USP39-206ENST00000448971 YTHDF1Q9BYJ9 559 aaKnown RBP11.84□□□□□ -0.51
USP39-206ENST00000448971 SELENOIQ9C0D9 397 aa11.84□□□□□ -0.51
USP39-206ENST00000448971 IFT22Q9H7X7 185 aa11.84□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms