RNA–Protein interactions for RNA: ENST00000448935.6

VIPAS39-203, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

TSL 2 BASIC

Gene VIPAS39, Length 1,623 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-203ENST00000448935 WDR86Q86TI4 376 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 SGPP2Q8IWX5 399 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 OR11H4Q8NGC9 324 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 CASTOR1Q8WTX7 329 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 DYRK2Q92630 601 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 PIK3IP1Q96FE7 263 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 ZNF488Q96MN9 340 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 RTBDNQ9BSG5 229 aaPredicted RBP8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 PDCD10Q9BUL8 212 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 DPCDQ9BVM2 203 aaPredicted RBP8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 WDR13Q9H1Z4 485 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 JKAMPQ9P055 326 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 ATP23Q9Y6H3 246 aa8.97□□□□□ -0.97
VIPAS39-203ENST00000448935 HEATR1Q9H583 2144 aaKnown RBP8.96□□□□□ -0.97
VIPAS39-203ENST00000448935 PLSCR5A0PG75 271 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 A6NLC8 198 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 HMSDA8MTL9 139 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 TRDCB7Z8K6 153 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 H0YL77 283 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 CD8AP01732 235 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 TK1P04183 234 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 ZNF728P0DKX0 622 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 PTAFRP25105 342 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 CD200P41217 278 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 ABCA11PQ4W5N1 156 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 Q6P435 159 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 CLEC18BQ6UXF7 455 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 SLC38A6Q8IZM9 456 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 TMEM230Q96A57 120 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 MOB3AQ96BX8 217 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 CYYR1Q96J86 154 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 VRK1Q99986 396 aaPredicted RBP8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 SYT3Q9BQG1 590 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 HES4Q9HCC6 221 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 RAB18Q9NP72 206 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 IL36RNQ9UBH0 155 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 KCNIP3Q9Y2W7 256 aa8.96□□□□□ -0.98
VIPAS39-203ENST00000448935 TRAV24A0A0B4J272 114 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 DBX1A6NMT0 343 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 G3V3Q6 166 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 HS3ST1O14792 307 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 SIX6O95475 246 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 NFYAP23511 347 aaPredicted RBP8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 CD40P25942 277 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 DUSP1P28562 367 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 FCGR2CP31995 323 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 RBMXP38159 391 aaKnown RBP8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 KCNJ3P48549 501 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 SUMO1P63165 101 aaKnown RBP8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 NKX6-1P78426 367 aaPredicted RBP8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 C2orf68Q2NKX9 166 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 PAN3Q58A45 887 aaKnown RBP8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 LY6G6FQ5SQ64 297 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 DCAF12L2Q5VW00 463 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 GSG1LQ6UXU4 331 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 C20orf204Q6ZNR8 217 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 NCCRP1Q6ZVX7 275 aaPredicted RBP8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 ZNF767PQ75MW2 155 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 WFDC8Q8IUA0 241 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 MRPL41Q8IXM3 137 aaKnown RBP8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 FAM185AQ8N0U4 392 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 CCDC71LQ8N9Z2 235 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 NUP37Q8NFH4 326 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 OR10Z1Q8NGY1 313 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 RDH5Q92781 318 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 NGBQ9NPG2 151 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 RASL12Q9NYN1 266 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 DUSP13Q9UII6 198 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 SH3BGRL2Q9UJC5 107 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 CHD8Q9HCK8 2581 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 CELSR3Q9NYQ7 3312 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 LOC400499M0QZD8 3231 aa8.95□□□□□ -0.98
VIPAS39-203ENST00000448935 IGLV3-9A0A075B6K5 115 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 TEX13DA0A0J9YY54 714 aaPredicted RBP8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 RFPL4AA6NLU0 287 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 RFPL4AL1F8VTS6 287 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 L7N2F9 121 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 OR2H2O95918 312 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 KNG1P01042 644 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 IFNA2P01563 188 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 GLRA1P23415 457 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 ZNF81P51508 661 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 BAMBIQ13145 260 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 SMIM21Q3B7S5 101 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 PRR30Q53SZ7 412 aaPredicted RBP8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 ZNF880Q6PDB4 577 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 Q6ZR03 302 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 KCTD9Q7L273 389 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 ST6GALNAC3Q8NDV1 305 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 OR4A4PQ8NGN8 299 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 MRPL30Q8TCC3 161 aaKnown RBP8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 MSL2Q9HCI7 577 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 C1orf123Q9NWV4 160 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 SLC23A1Q9UHI7 598 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 FZR1Q9UM11 496 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 KMT2BQ9UMN6 2715 aaPredicted RBP8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 ZGRF1Q86YA3 2104 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 TRGV8A0A0C4DH27 118 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 C5orf51A6NDU8 294 aa8.94□□□□□ -0.98
VIPAS39-203ENST00000448935 CRYM-AS1A6NIL9 109 aa8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.3 ms