RNA–Protein interactions for RNA: ENST00000447734.5

PMS1-216, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5

Gene PMS1, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-216ENST00000447734 COX7A2P2O60397 106 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 IGLV2-8P01709 118 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 IGHV3-11P01762 117 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 SNRPAP09012 282 aaKnown RBP2.68□□□□□ -1.98
PMS1-216ENST00000447734 OR4E1P0C645 316 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 SCGB1C2P0DMR2 95 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 CXCL3P19876 107 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 ME2P23368 584 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 ELK4P28324 431 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 MIPP30301 263 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 H2BFSP57053 126 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 CENPWQ5EE01 88 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 FAM78AQ5JUQ0 283 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 ZNF684Q5T5D7 378 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 HIST2H3PS2Q5TEC6 136 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 RSBN1Q5VWQ0 802 aaPredicted RBP2.68□□□□□ -1.98
PMS1-216ENST00000447734 SPATA31B1PQ5VZV4 182 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 OR10K2Q6IF99 312 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 ZNF773Q6PK81 442 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 SCGB1D4Q6XE38 83 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 CLEC20AQ6ZU45 233 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 AKAP14Q86UN6 197 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 NAA40Q86UY6 237 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 ZNF584Q8IVC4 421 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 SLC25A45Q8N413 288 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 TMEM161BQ8NDZ6 487 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 SCGB1C1Q8TD33 95 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 TMBIM1Q969X1 311 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 EXOSC8Q96B26 276 aaKnown RBP2.68□□□□□ -1.98
PMS1-216ENST00000447734 SLC35E1Q96K37 410 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 YPEL4Q96NS1 127 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 ZIM3Q96PE6 472 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 RTBDNQ9BSG5 229 aaPredicted RBP2.68□□□□□ -1.98
PMS1-216ENST00000447734 TLNRD1Q9H1K6 362 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 DDX19AQ9NUU7 478 aaKnown RBP2.68□□□□□ -1.98
PMS1-216ENST00000447734 FKBP14Q9NWM8 211 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 PAQR5Q9NXK6 330 aaPredicted RBP2.68□□□□□ -1.98
PMS1-216ENST00000447734 GLTPQ9NZD2 209 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 MDFICQ9P1T7 246 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 FBXO5Q9UKT4 447 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 RAB26Q9ULW5 256 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 POMPQ9Y244 141 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 NOTCH4Q99466 2003 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 CLUHO75153 1309 aa2.68□□□□□ -1.98
PMS1-216ENST00000447734 CARMIL3Q8ND23 1372 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 LOC102724200A0A096LPH7 203 aaPredicted RBP2.67□□□□□ -1.98
PMS1-216ENST00000447734 TMEM72A0PK05 275 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 A6NDX4 124 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 CLDN24A6NM45 220 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 M0QYV0 167 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 KCNK2O95069 426 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 CNIH1O95406 144 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 HBZP02008 142 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 IL6P05231 212 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 IGHV1-8P0DP01 117 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 UCHL3P15374 230 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 SLC6A1P30531 599 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 REG1BP48304 166 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 SPCS3P61009 180 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 NAA20P61599 178 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 SKP2Q13309 424 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 SLC9A3R2Q15599 337 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 MAPK14Q16539 360 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 IL17AQ16552 155 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 SLC25A30Q5SVS4 291 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 FAM222AQ5U5X8 452 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 OTPQ5XKR4 325 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 GLYATQ6IB77 296 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 SHISA6Q6ZSJ9 500 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 ITPRIPQ8IWB1 547 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 CLDN22Q8N7P3 220 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 SLC35G3Q8N808 338 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 ZIC4Q8N9L1 334 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 Q8N9W7 124 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 PXT1Q8NFP0 134 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 OR5K1Q8NHB7 308 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 LINC01006Q8NI28 216 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 EEF1AKMT1Q8WVE0 214 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 OR2A5Q96R48 311 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 PHB2Q99623 299 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 CDX2Q99626 313 aaPredicted RBP2.67□□□□□ -1.98
PMS1-216ENST00000447734 NRTNQ99748 197 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 PRRT1Q99946 306 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 TSGA10Q9BZW7 698 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 ZNF436Q9C0F3 470 aaPredicted RBP2.67□□□□□ -1.98
PMS1-216ENST00000447734 ZSCAN16Q9H4T2 348 aaPredicted RBP2.67□□□□□ -1.98
PMS1-216ENST00000447734 PLEKHF2Q9H8W4 249 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 NANOGQ9H9S0 305 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 UBQLN4Q9NRR5 601 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 GID8Q9NWU2 228 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 OR12D3Q9UGF7 316 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 BTRCQ9Y297 605 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 CSAG2Q9Y5P2 127 aa2.67□□□□□ -1.98
PMS1-216ENST00000447734 ZNFX1Q9P2E3 1918 aaKnown RBP2.67□□□□□ -1.98
PMS1-216ENST00000447734 OR5K4A6NMS3 321 aa2.66□□□□□ -1.98
PMS1-216ENST00000447734 VGLL3A8MV65 326 aa2.66□□□□□ -1.98
PMS1-216ENST00000447734 KLLNB2CW77 178 aa2.66□□□□□ -1.98
PMS1-216ENST00000447734 C9JQL5 133 aa2.66□□□□□ -1.98
PMS1-216ENST00000447734 H0YJX3 145 aa2.66□□□□□ -1.98
PMS1-216ENST00000447734 H3BQV1 296 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms