RNA–Protein interactions for RNA: ENST00000447376.1

SF3A1-204, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 5

Gene SF3A1, Length 418 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-204ENST00000447376 LMO1P25800 156 aa13.41□□□□□ -0.26
SF3A1-204ENST00000447376 HTR2CP28335 458 aa13.41□□□□□ -0.26
SF3A1-204ENST00000447376 P2RX3P56373 397 aa13.41□□□□□ -0.26
SF3A1-204ENST00000447376 KLRD1Q13241 179 aa13.41□□□□□ -0.26
SF3A1-204ENST00000447376 SLC9A3R2Q15599 337 aa13.41□□□□□ -0.26
SF3A1-204ENST00000447376 MIDNQ504T8 468 aa13.41□□□□□ -0.26
SF3A1-204ENST00000447376 PAN3Q58A45 887 aaKnown RBP13.41□□□□□ -0.26
SF3A1-204ENST00000447376 NHLRC3Q5JS37 347 aa13.41□□□□□ -0.26
SF3A1-204ENST00000447376 C1orf100Q5SVJ3 147 aa13.41□□□□□ -0.26
SF3A1-204ENST00000447376 C22orf42Q6IC83 251 aa13.41□□□□□ -0.26
SF3A1-204ENST00000447376 Q6YL49 198 aa13.41□□□□□ -0.26
SF3A1-204ENST00000447376 LYPD6Q86Y78 171 aa13.41□□□□□ -0.26
SF3A1-204ENST00000447376 OR4S1Q8NGB4 309 aa13.41□□□□□ -0.26
SF3A1-204ENST00000447376 OR4D6Q8NGJ1 314 aa13.41□□□□□ -0.26
SF3A1-204ENST00000447376 PPA2Q9H2U2 334 aa13.41□□□□□ -0.26
SF3A1-204ENST00000447376 PRDM13Q9H4Q3 707 aa13.41□□□□□ -0.26
SF3A1-204ENST00000447376 UBE2J1Q9Y385 318 aaPredicted RBP13.41□□□□□ -0.26
SF3A1-204ENST00000447376 AK6Q9Y3D8 172 aaKnown RBP13.41□□□□□ -0.26
SF3A1-204ENST00000447376 CSN2P05814 226 aa13.4□□□□□ -0.26
SF3A1-204ENST00000447376 SAA4P35542 130 aa13.4□□□□□ -0.26
SF3A1-204ENST00000447376 OR3A1P47881 315 aa13.4□□□□□ -0.26
SF3A1-204ENST00000447376 RBM11P57052 281 aaKnown RBP13.4□□□□□ -0.26
SF3A1-204ENST00000447376 MPV17LQ2QL34 196 aa13.4□□□□□ -0.26
SF3A1-204ENST00000447376 TUSC1Q2TAM9 212 aa13.4□□□□□ -0.26
SF3A1-204ENST00000447376 KRBOX4Q5JUW0 171 aa13.4□□□□□ -0.26
SF3A1-204ENST00000447376 GDPGP1Q6ZNW5 385 aa13.4□□□□□ -0.26
SF3A1-204ENST00000447376 TPRX1Q8N7U7 411 aa13.4□□□□□ -0.26
SF3A1-204ENST00000447376 KCTD7Q96MP8 289 aa13.4□□□□□ -0.26
SF3A1-204ENST00000447376 BARHL1Q9BZE3 327 aa13.4□□□□□ -0.26
SF3A1-204ENST00000447376 TXNL4BQ9NX01 149 aaKnown RBP13.4□□□□□ -0.26
SF3A1-204ENST00000447376 V9GY05 133 aa13.4□□□□□ -0.26
SF3A1-204ENST00000447376 A0A0G2JK05 382 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 C17orf98A8MV24 154 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 SLC33A1O00400 549 aaPredicted RBP13.39□□□□□ -0.27
SF3A1-204ENST00000447376 SLC17A2O00624 439 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 SLC22A1O15245 554 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 CRTAPO75718 401 aaPredicted RBP13.39□□□□□ -0.27
SF3A1-204ENST00000447376 OR7C1O76099 320 aaPredicted RBP13.39□□□□□ -0.27
SF3A1-204ENST00000447376 BPNT1O95861 308 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 MELTFP08582 738 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 CD37P11049 281 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 COX7A1P24310 79 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 KCNJ3P48549 501 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 PRB3Q04118 309 aaPredicted RBP13.39□□□□□ -0.27
SF3A1-204ENST00000447376 ATXN7L3Q14CW9 347 aaPredicted RBP13.39□□□□□ -0.27
SF3A1-204ENST00000447376 RAB11BQ15907 218 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 PIGYQ3MUY2 71 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 OR52W1Q6IF63 320 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 Q6P435 159 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 C16orf87Q6PH81 154 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 ZNF782Q6ZMW2 699 aaPredicted RBP13.39□□□□□ -0.27
SF3A1-204ENST00000447376 TPRA1Q86W33 373 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 PIP4P2Q8N4L2 257 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 KCNG3Q8TAE7 436 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 TNFRSF14Q92956 283 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 CHCHD6Q9BRQ6 235 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 MRPS26Q9BYN8 205 aaKnown RBP13.39□□□□□ -0.27
SF3A1-204ENST00000447376 OR51E2Q9H255 320 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 SPACA1Q9HBV2 294 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 TNFRSF19Q9NS68 423 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 ING3Q9NXR8 418 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 OR6C3Q9NZP0 311 aa13.39□□□□□ -0.27
SF3A1-204ENST00000447376 SOX21Q9Y651 276 aaPredicted RBP13.39□□□□□ -0.27
SF3A1-204ENST00000447376 LOC100506127A0A0U1RQW1 187 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 HSPB6O14558 160 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 CLPXO76031 633 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 IGHV1-8P0DP01 117 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 ARSBP15848 533 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 MGMTP16455 207 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 RAB3BP20337 219 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 GADD45AP24522 165 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 DLX1P56177 255 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 AESQ08117 197 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 FOXL1Q12952 345 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 LDLRAD3Q86YD5 345 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 PNKDQ8N490 385 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 ZNF565Q8N9K5 539 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 NEK7Q8TDX7 302 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 SELENOIQ9C0D9 397 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 IFT22Q9H7X7 185 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 TAS2R3Q9NYW6 316 aa13.38□□□□□ -0.27
SF3A1-204ENST00000447376 ODAMA1E959 279 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 MEX3AA1L020 520 aaKnown RBP13.37□□□□□ -0.27
SF3A1-204ENST00000447376 FAM90A10PA6NDY2 464 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 FAM90A18PA6NE21 464 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 FAM90A16PA6NEW6 464 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 FAM90A20PA6NIJ5 464 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 FAM90A8PA6NJQ4 464 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 FAM90A7PA6NKC0 464 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 FAM90A22PA8MWA6 464 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 FAM90A12PA8MX19 464 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 FAM90A5PA8MXJ8 464 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 FAM90A23PA8MXZ1 464 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 GEMIN2O14893 280 aaKnown RBP13.37□□□□□ -0.27
SF3A1-204ENST00000447376 FAM90A15PP0C7V4 464 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 FAM90A13PP0C7W8 464 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 FAM90A14PP0C7W9 464 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 FAM90A24PP0C7X0 464 aa13.37□□□□□ -0.27
SF3A1-204ENST00000447376 DYNC1I2Q13409 638 aaKnown RBP13.37□□□□□ -0.27
SF3A1-204ENST00000447376 ATAD3CQ5T2N8 411 aa13.37□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms