RNA–Protein interactions for RNA: ENST00000446876.1

HDAC4-204, Transcript of histone deacetylase 4, humanhuman

TSL 4

Gene HDAC4, Length 554 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-204ENST00000446876 HSD17B12Q53GQ0 312 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 C16orf87Q6PH81 154 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 BRICD5Q6PL45 260 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 C12orf54Q6X4T0 127 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 ZNF367Q7RTV3 350 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 NKAIN3Q8N8D7 197 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 SUMF2Q8NBJ7 301 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 CYYR1Q96J86 154 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 KCNK15Q9H427 330 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 BANF2Q9H503 90 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 TCF7L1Q9HCS4 588 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 ISYNA1Q9NPH2 558 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 ACOT13Q9NPJ3 140 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 KIF25Q9UIL4 384 aa12.06□□□□□ -0.48
HDAC4-204ENST00000446876 UBE2J1Q9Y385 318 aaPredicted RBP12.06□□□□□ -0.48
HDAC4-204ENST00000446876 TRAV39A0A0B4J263 110 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 FUOMA2VDF0 154 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 ARG1P05089 322 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 HKR1P10072 659 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 GTF2F2P13984 249 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 GLP1RP43220 463 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 EMX1Q04741 257 aaPredicted RBP12.05□□□□□ -0.48
HDAC4-204ENST00000446876 SSX1Q16384 188 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 AWAT1Q58HT5 328 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 NHLRC3Q5JS37 347 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 LDLRAD2Q5SZI1 272 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 ATAD3CQ5T2N8 411 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 DYNAPQ8N1N2 210 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 TMEM86BQ8N661 226 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 TMEM104Q8NE00 496 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 OR13D1Q8NGV5 346 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 FAM46BQ96A09 425 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 DPCDQ9BVM2 203 aaPredicted RBP12.05□□□□□ -0.48
HDAC4-204ENST00000446876 POMT1Q9Y6A1 747 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 SESN1Q9Y6P5 492 aa12.05□□□□□ -0.48
HDAC4-204ENST00000446876 MEIKINA0A087WXM9 373 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 ODF3BA8MYP8 253 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 GPR137BO60478 399 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 ZNF780AO75290 641 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-204ENST00000446876 CRTAPO75718 401 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-204ENST00000446876 SRMP19623 302 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 CDK2P24941 298 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 LGALS4P56470 323 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 FABP5Q01469 135 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 DYNC1I2Q13409 638 aaKnown RBP12.04□□□□□ -0.48
HDAC4-204ENST00000446876 C17orf58Q2M2W7 97 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 PLA1AQ53H76 456 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 UTF1Q5T230 341 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 RSBN1Q5VWQ0 802 aaPredicted RBP12.04□□□□□ -0.48
HDAC4-204ENST00000446876 ZNF626Q68DY1 528 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 CDH26Q8IXH8 852 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 BEND2Q8NDZ0 799 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 OR13A1Q8NGR1 328 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 PHYHIPQ92561 330 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 CORO2AQ92828 525 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 GFI1Q99684 422 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 UQCC2Q9BRT2 126 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 GAL3ST2Q9H3Q3 398 aa12.04□□□□□ -0.48
HDAC4-204ENST00000446876 IGHV2-26A0A0B4J1V2 119 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 MEGF11A6BM72 1044 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 H3BUX3 64 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 MGMTP16455 207 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 COMPP49747 757 aaPredicted RBP12.03□□□□□ -0.48
HDAC4-204ENST00000446876 RELBQ01201 579 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 GPR176Q14439 515 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 MPV17LQ2QL34 196 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 OR10K2Q6IF99 312 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 LINC00596Q86U02 117 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 SPARTQ8N0X7 666 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 OR11H6Q8NGC7 330 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 MRGPRDQ8TDS7 321 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 NEK7Q8TDX7 302 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 FOXRED1Q96CU9 486 aaPredicted RBP12.03□□□□□ -0.48
HDAC4-204ENST00000446876 SELENOIQ9C0D9 397 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 TMEM133Q9H2Q1 129 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 DPAGT1Q9H3H5 408 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 IFT22Q9H7X7 185 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 TAS2R3Q9NYW6 316 aa12.03□□□□□ -0.48
HDAC4-204ENST00000446876 TENM1Q9UKZ4 2725 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 BTBD17A6NE02 478 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 JUNBP17275 347 aaPredicted RBP12.02□□□□□ -0.49
HDAC4-204ENST00000446876 MDKP21741 143 aaPredicted RBP12.02□□□□□ -0.49
HDAC4-204ENST00000446876 PSMA1P25786 263 aaKnown RBP12.02□□□□□ -0.49
HDAC4-204ENST00000446876 CALRP27797 417 aaKnown RBP12.02□□□□□ -0.49
HDAC4-204ENST00000446876 GABRA5P31644 462 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 TRAM1Q15629 374 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 LY6EQ16553 131 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 C1orf100Q5SVJ3 147 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 GLT8D1Q68CQ7 371 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 HEPN1Q6WQI6 88 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 SVOPQ8N4V2 548 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 Q96M66 194 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 SSX3Q99909 188 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 CLEC7AQ9BXN2 247 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 BARHL1Q9BZE3 327 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 SLITRK2Q9H156 845 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 ZNF286AQ9HBT8 521 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 PCDHB16Q9NRJ7 776 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 CALYQ9NYX4 217 aa12.02□□□□□ -0.49
HDAC4-204ENST00000446876 OR6C3Q9NZP0 311 aa12.02□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 102 ms